Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:120637224-120747407

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm42657 5 120641621 to 120641831 210 + pseudogene predicted gene 42657
Gm15749 5 120648040 to 120648749 709 + lincRNA gene predicted gene 15749
Cpgi16509 5 120648596 to 120649650 1054 CpG island CpG island 16509
Rasal1 5 120648812 to 120679597 30785 + protein coding gene RAS protein activator like 1 (GAP1 like)
Tssr48531 5 120649213 to 120649259 46 + TSS region transcription start site region 48531
Tssr48532 5 120649336 to 120649347 11 + TSS region transcription start site region 48532
Tssr48533 5 120655385 to 120655389 4 + TSS region transcription start site region 48533
Cpgi16510 5 120662093 to 120662260 167 CpG island CpG island 16510
Tssr48534 5 120678548 to 120678556 8 + TSS region transcription start site region 48534
Tssr48535 5 120678569 to 120678576 7 + TSS region transcription start site region 48535
Dtx1 5 120680203 to 120711669 31466 - protein coding gene deltex 1, E3 ubiquitin ligase
Cpgi16511 5 120680880 to 120681452 572 CpG island CpG island 16511
Cpgi16512 5 120682346 to 120682672 326 CpG island CpG island 16512
Tssr52951 5 120683105 to 120683157 52 - TSS region transcription start site region 52951
Tssr52952 5 120683414 to 120683461 47 - TSS region transcription start site region 52952
Tssr52953 5 120685746 to 120685767 21 - TSS region transcription start site region 52953
Cpgi16513 5 120692224 to 120692407 183 CpG island CpG island 16513
Cpgi16514 5 120694174 to 120695520 1346 CpG island CpG island 16514
Tssr52954 5 120694590 to 120694603 13 - TSS region transcription start site region 52954
Cpgi16515 5 120710067 to 120712162 2095 CpG island CpG island 16515
Tssr52955 5 120711596 to 120711609 13 - TSS region transcription start site region 52955
Tssr52956 5 120711613 to 120711692 79 - TSS region transcription start site region 52956
Tssr52957 5 120711697 to 120711708 11 - TSS region transcription start site region 52957
Tssr48536 5 120711776 to 120711787 11 + TSS region transcription start site region 48536
Cpgi16516 5 120714348 to 120714547 199 CpG island CpG island 16516
Oas2 5 120730333 to 120749853 19520 - protein coding gene 2'-5' oligoadenylate synthetase 2
Tssr48537 5 120735009 to 120735054 45 + TSS region transcription start site region 48537
Tssr52958 5 120735919 to 120735924 5 - TSS region transcription start site region 52958
Tssr52959 5 120743556 to 120743604 48 - TSS region transcription start site region 52959
Tssr52960 5 120743642 to 120743663 21 - TSS region transcription start site region 52960
Tssr52961 5 120743669 to 120743698 29 - TSS region transcription start site region 52961
Tssr52962 5 120743791 to 120743846 55 - TSS region transcription start site region 52962
Tssr52963 5 120743888 to 120743893 5 - TSS region transcription start site region 52963
Tssr52964 5 120744139 to 120744175 36 - TSS region transcription start site region 52964
Tssr52965 5 120744226 to 120744243 17 - TSS region transcription start site region 52965
Tssr52966 5 120744297 to 120744313 16 - TSS region transcription start site region 52966
Tssr52967 5 120744323 to 120744349 26 - TSS region transcription start site region 52967
Tssr52968 5 120745705 to 120745716 11 - TSS region transcription start site region 52968
Tssr52969 5 120745762 to 120745783 21 - TSS region transcription start site region 52969
Gm43068 5 120746036 to 120747308 1272 + unclassified gene predicted gene 43068