MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:120072816-120272831

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr48497	5	120076668 to 120076670	2	+	TSS region	transcription start site region 48497
Cpgi16477	5	120084711 to 120084963	252		CpG island	CpG island 16477
Cpgi16478	5	120088644 to 120088832	188		CpG island	CpG island 16478
Cpgi16479	5	120116297 to 120116882	585		CpG island	CpG island 16479
Tssr48498	5	120116480 to 120116525	45	+	TSS region	transcription start site region 48498
Rbm19	5	120116513 to 120198971	82458	+	protein coding gene	RNA binding motif protein 19
Tssr48499	5	120116526 to 120116551	25	+	TSS region	transcription start site region 48499
Gm10390	5	120121096 to 120139263	18167	-	antisense lncRNA gene	predicted gene 10390
Tssr52921	5	120139247 to 120139276	29	-	TSS region	transcription start site region 52921
Tssr52922	5	120139281 to 120139295	14	-	TSS region	transcription start site region 52922
Tssr48500	5	120145799 to 120145803	4	+	TSS region	transcription start site region 48500
Tssr48501	5	120172816 to 120172831	15	+	TSS region	transcription start site region 48501
Cpgi16480	5	120211015 to 120211325	310		CpG island	CpG island 16480
Gm31836	5	120222030 to 120235233	13203	-	lncRNA gene	predicted gene, 31836
D5Mit408	5	120231037 to 120231158	121		DNA segment	DNA Segment, Chr 5 Massachusetts Institute of Technology 408
Cpgi16481	5	120241557 to 120241839	282		CpG island	CpG island 16481
Cpgi16482	5	120251958 to 120252529	571		CpG island	CpG island 16482
Gm42655	5	120255258 to 120256391	1133	+	unclassified gene	predicted gene 42655
Cpgi16483	5	120269409 to 120269883	474		CpG island	CpG island 16483