Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Sluc33 | 5 | 16334916 | QTL | susceptibility to lung cancer 33 | ||
Gm5563 | 5 | 29349 | - | lncRNA gene | predicted gene 5563 | |
Cpgi16467 | 5 | 1718 | CpG island | CpG island 16467 | ||
1700021F13Rik | 5 | 2540 | - | lincRNA gene | RIKEN cDNA 1700021F13 gene | |
Tssr52917 | 5 | 15 | - | TSS region | transcription start site region 52917 | |
repro2 | 5 | 3605102 | heritable phenotypic marker | reproductive mutant 2, JAX Reproductive Mutagenesis Program | ||
Sluc33b | 5 | 159 | QTL | susceptibility to lung cancer 33b | ||
D5Mit68 | 5 | 159 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 68 | ||
Bbaa24 | 5 | 21907739 | QTL | B.burgdorferi-associated arthritis 24 | ||
D5Mit431 | 5 | 115 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 431 | ||
Nidd7k | 5 | 29616889 | QTL | Nidd7 on KK-A |
||
Tssr52918 | 5 | 1 | - | TSS region | transcription start site region 52918 | |
Tssr52919 | 5 | 16 | - | TSS region | transcription start site region 52919 | |
Gm43050 | 5 | 3472 | - | lincRNA gene | predicted gene 43050 | |
Cpgi16468 | 5 | 863 | CpG island | CpG island 16468 | ||
Tssr52920 | 5 | 12 | - | TSS region | transcription start site region 52920 | |
Tssr48477 | 5 | 13 | + | TSS region | transcription start site region 48477 | |
Tssr48478 | 5 | 25 | + | TSS region | transcription start site region 48478 | |
Cpgi16469 | 5 | 187 | CpG island | CpG island 16469 | ||
Tbx5 | 5 | 52551 | + | protein coding gene | T-box 5 | |
Tssr48479 | 5 | 10 | + | TSS region | transcription start site region 48479 | |
Tssr48480 | 5 | 13 | + | TSS region | transcription start site region 48480 | |
Tssr48481 | 5 | 9 | + | TSS region | transcription start site region 48481 | |
Tssr48482 | 5 | 3 | + | TSS region | transcription start site region 48482 | |
Tssr48483 | 5 | 11 | + | TSS region | transcription start site region 48483 | |
Tssr48484 | 5 | 16 | + | TSS region | transcription start site region 48484 | |
Tssr48485 | 5 | 15 | + | TSS region | transcription start site region 48485 | |
Tssr48486 | 5 | 6 | + | TSS region | transcription start site region 48486 | |
Cpgi16470 | 5 | 393 | CpG island | CpG island 16470 | ||
Tssr48487 | 5 | 30 | + | TSS region | transcription start site region 48487 | |
Cpgi16471 | 5 | 737 | CpG island | CpG island 16471 | ||
Tssr48488 | 5 | 17 | + | TSS region | transcription start site region 48488 | |
Tssr48489 | 5 | 20 | + | TSS region | transcription start site region 48489 | |
Cpgi16472 | 5 | 248 | CpG island | CpG island 16472 | ||
Cpgi16473 | 5 | 271 | CpG island | CpG island 16473 | ||
Cpgi16474 | 5 | 289 | CpG island | CpG island 16474 | ||
D5Mit367 | 5 | 104 | DNA segment | DNA Segment, Chr 5, Massachusetts Institute of Technology 367 | ||
Cpgi16475 | 5 | 701 | CpG island | CpG island 16475 | ||
Tssr48490 | 5 | 13 | + | TSS region | transcription start site region 48490 | |
Tssr48491 | 5 | 11 | + | TSS region | transcription start site region 48491 | |
oar | 5 | 5571070 | heritable phenotypic marker | oarleg | ||
D5Mit424 | 5 | 132 | DNA segment | DNA Segment, Chr 5, Massachusetts Institute of Technology 424 | ||
D5Mit425 | 5 | 123 | DNA segment | DNA Segment, Chr 5, Massachusetts Institute of Technology 425 | ||
Cia27 | 5 | -44725877 | QTL | collagen induced arthritis QTL 27 | ||
Tssr1619 | 5 | 4 | + | TSS region | transcription start site region 1619 | |
Tssr48492 | 5 | 4 | + | TSS region | transcription start site region 48492 | |
Tssr48493 | 5 | 8 | + | TSS region | transcription start site region 48493 | |
Cpgi16476 | 5 | 486 | CpG island | CpG island 16476 | ||
Tssr48494 | 5 | 2 | + | TSS region | transcription start site region 48494 | |
Gm43269 | 5 | 1908 | + | lincRNA gene | predicted gene 43269 | |
Tssr48495 | 5 | 5 | + | TSS region | transcription start site region 48495 | |
Gm31773 | 5 | 518 | - | lncRNA gene | predicted gene, 31773 | |
Tssr48496 | 5 | 35 | + | TSS region | transcription start site region 48496 | |
Gm38554 | 5 | 4137 | + | lincRNA gene | predicted gene, 38554 | |
Gm42018 | 5 | 2832 | + | lncRNA gene | predicted gene, 42018 | |
Gm42019 | 5 | 3733 | - | lncRNA gene | predicted gene, 42019 | |
Tssr1620 | 5 | 1 | + | TSS region | transcription start site region 1620 | |
n-R5s176 | 5 | 108 | + | rRNA gene | nuclear encoded rRNA 5S 176 | |
Tssr48497 | 5 | 2 | + | TSS region | transcription start site region 48497 | |
Cpgi16477 | 5 | 252 | CpG island | CpG island 16477 | ||
Cpgi16478 | 5 | 188 | CpG island | CpG island 16478 | ||
Cpgi16479 | 5 | 585 | CpG island | CpG island 16479 | ||
Tssr48498 | 5 | 45 | + | TSS region | transcription start site region 48498 | |
Rbm19 | 5 | 82458 | + | protein coding gene | RNA binding motif protein 19 | |
Tssr48499 | 5 | 25 | + | TSS region | transcription start site region 48499 | |
Gm10390 | 5 | 18167 | - | antisense lncRNA gene | predicted gene 10390 | |
Tssr52921 | 5 | 29 | - | TSS region | transcription start site region 52921 | |
Tssr52922 | 5 | 14 | - | TSS region | transcription start site region 52922 | |
Tssr48500 | 5 | 4 | + | TSS region | transcription start site region 48500 | |
Tssr48501 | 5 | 15 | + | TSS region | transcription start site region 48501 | |
Cpgi16480 | 5 | 310 | CpG island | CpG island 16480 | ||
Gm31836 | 5 | 13203 | - | lncRNA gene | predicted gene, 31836 | |
D5Mit408 | 5 | 121 | DNA segment | DNA Segment, Chr 5 Massachusetts Institute of Technology 408 | ||
Cpgi16481 | 5 | 282 | CpG island | CpG island 16481 | ||
Cpgi16482 | 5 | 571 | CpG island | CpG island 16482 | ||
Gm42655 | 5 | 1133 | + | unclassified gene | predicted gene 42655 | |
Cpgi16483 | 5 | 474 | CpG island | CpG island 16483 | ||
Gm26474 | 5 | 121 | + | miRNA gene | predicted gene, 26474 | |
Cpgi16484 | 5 | 1083 | CpG island | CpG island 16484 | ||
Cpgi16485 | 5 | 678 | CpG island | CpG island 16485 | ||
Gm42654 | 5 | 6468 | - | lincRNA gene | predicted gene 42654 | |
Cpgi16486 | 5 | 415 | CpG island | CpG island 16486 | ||
Gm27199 | 5 | 12108 | - | antisense lncRNA gene | predicted gene 27199 | |
Gm31976 | 5 | 7886 | - | lncRNA gene | predicted gene, 31976 | |
Cpgi16487 | 5 | 290 | CpG island | CpG island 16487 | ||
Cpgi16488 | 5 | 165 | CpG island | CpG island 16488 | ||
Cpgi16489 | 5 | 1042 | CpG island | CpG island 16489 | ||
Cpgi16490 | 5 | 1925 | CpG island | CpG island 16490 | ||
Lhx5 | 5 | 9524 | + | protein coding gene | LIM homeobox protein 5 | |
Tssr52923 | 5 | 14 | - | TSS region | transcription start site region 52923 | |
Tssr48502 | 5 | 14 | + | TSS region | transcription start site region 48502 | |
Tssr48503 | 5 | 3 | + | TSS region | transcription start site region 48503 | |
Tssr48504 | 5 | 7 | + | TSS region | transcription start site region 48504 | |
Tssr48505 | 5 | 9 | + | TSS region | transcription start site region 48505 | |
Tssr48506 | 5 | 11 | + | TSS region | transcription start site region 48506 | |
Tssr48507 | 5 | 16 | + | TSS region | transcription start site region 48507 | |
Cpgi16491 | 5 | 375 | CpG island | CpG island 16491 | ||
Cpgi16492 | 5 | 1547 | CpG island | CpG island 16492 | ||
Cpgi16493 | 5 | 480 | CpG island | CpG island 16493 | ||
Cpgi16494 | 5 | 152 | CpG island | CpG island 16494 | ||
Cpgi16495 | 5 | 1007 | CpG island | CpG island 16495 | ||
Tssr48508 | 5 | 19 | + | TSS region | transcription start site region 48508 | |
Tssr48509 | 5 | 8 | + | TSS region | transcription start site region 48509 | |
Cpgi16496 | 5 | 153 | CpG island | CpG island 16496 | ||
Sdsl | 5 | 14624 | - | protein coding gene | serine dehydratase-like | |
Tssr52924 | 5 | 55 | - | TSS region | transcription start site region 52924 | |
Tssr52925 | 5 | 13 | - | TSS region | transcription start site region 52925 | |
Tssr48510 | 5 | 16 | + | TSS region | transcription start site region 48510 | |
Sds | 5 | 7385 | + | protein coding gene | serine dehydratase | |
Gm15690 | 5 | 1061 | - | antisense lncRNA gene | predicted gene 15690 | |
Cpgi16497 | 5 | 226 | CpG island | CpG island 16497 | ||
Plbd2 | 5 | 19730 | - | protein coding gene | phospholipase B domain containing 2 | |
Tssr52926 | 5 | 18 | - | TSS region | transcription start site region 52926 | |
Tssr52927 | 5 | 27 | - | TSS region | transcription start site region 52927 | |
Tssr52928 | 5 | 21 | - | TSS region | transcription start site region 52928 | |
Cpgi16498 | 5 | 831 | CpG island | CpG island 16498 | ||
Tssr52929 | 5 | 34 | - | TSS region | transcription start site region 52929 | |
Cpgi16499 | 5 | 585 | CpG island | CpG island 16499 | ||
Slc8b1 | 5 | 22856 | + | protein coding gene | solute carrier family 8 (sodium/lithium/calcium exchanger), member B1 | |
Tssr48511 | 5 | 38 | + | TSS region | transcription start site region 48511 | |
Tssr48512 | 5 | 33 | + | TSS region | transcription start site region 48512 | |
Tssr48513 | 5 | 21 | + | TSS region | transcription start site region 48513 | |
Tssr52930 | 5 | 26 | - | TSS region | transcription start site region 52930 | |
Tssr48514 | 5 | 43 | + | TSS region | transcription start site region 48514 | |
Tpcn1 | 5 | 54520 | - | protein coding gene | two pore channel 1 | |
Tssr52931 | 5 | 33 | - | TSS region | transcription start site region 52931 | |
Tssr52932 | 5 | 3 | - | TSS region | transcription start site region 52932 | |
Tssr52933 | 5 | 14 | - | TSS region | transcription start site region 52933 | |
Tssr52934 | 5 | 11 | - | TSS region | transcription start site region 52934 | |
2510016D11Rik | 5 | 984 | - | unclassified gene | RIKEN cDNA 2510016D11 gene | |
Tssr52935 | 5 | 29 | - | TSS region | transcription start site region 52935 | |
Tssr52936 | 5 | 3 | - | TSS region | transcription start site region 52936 | |
Tssr52937 | 5 | 50 | - | TSS region | transcription start site region 52937 | |
Tssr52938 | 5 | 20 | - | TSS region | transcription start site region 52938 | |
Tssr52939 | 5 | 29 | - | TSS region | transcription start site region 52939 | |
Tssr52940 | 5 | 9 | - | TSS region | transcription start site region 52940 | |
Tssr52941 | 5 | 20 | - | TSS region | transcription start site region 52941 | |
Tssr52942 | 5 | 30 | - | TSS region | transcription start site region 52942 | |
Tssr48515 | 5 | 45 | + | TSS region | transcription start site region 48515 | |
Tssr52943 | 5 | 15 | - | TSS region | transcription start site region 52943 | |
Cpgi16500 | 5 | 255 | CpG island | CpG island 16500 | ||
D5Mit159.1 | 5 | 125 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 159.1 | ||
D5Mit159 | 5 | 190 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 159 | ||
Cpgi16501 | 5 | 188 | CpG island | CpG island 16501 | ||
Cpgi16502 | 5 | 290 | CpG island | CpG island 16502 | ||
Tssr48516 | 5 | 27 | + | TSS region | transcription start site region 48516 | |
Cpgi16503 | 5 | 1111 | CpG island | CpG island 16503 | ||
Tssr52944 | 5 | 36 | - | TSS region | transcription start site region 52944 | |
Tssr52945 | 5 | 7 | - | TSS region | transcription start site region 52945 | |
Tssr48517 | 5 | 16 | + | TSS region | transcription start site region 48517 | |
Iqcd | 5 | 18102 | + | protein coding gene | IQ motif containing D | |
Tssr48518 | 5 | 41 | + | TSS region | transcription start site region 48518 | |
Gm38700 | 5 | 5723 | - | lncRNA gene | predicted gene, 38700 | |
Gm38465 | 5 | 4547 | - | lncRNA gene | predicted gene, 38465 | |
Cpgi16504 | 5 | 300 | CpG island | CpG island 16504 | ||
Tssr52946 | 5 | 21 | - | TSS region | transcription start site region 52946 | |
Rita1 | 5 | 3531 | - | protein coding gene | RBPJ interacting and tubulin associated 1 | |
Cpgi16505 | 5 | 1777 | CpG island | CpG island 16505 | ||
Tssr52947 | 5 | 40 | - | TSS region | transcription start site region 52947 | |
Tssr48519 | 5 | 39 | + | TSS region | transcription start site region 48519 | |
Ddx54 | 5 | 15485 | + | protein coding gene | DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 | |
Tssr48520 | 5 | 9 | + | TSS region | transcription start site region 48520 | |
Tssr48521 | 5 | 2 | + | TSS region | transcription start site region 48521 | |
Tssr48522 | 5 | 7 | + | TSS region | transcription start site region 48522 | |
Tssr48523 | 5 | 41 | + | TSS region | transcription start site region 48523 | |
Tssr48524 | 5 | 22 | + | TSS region | transcription start site region 48524 | |
Tssr48525 | 5 | 21 | + | TSS region | transcription start site region 48525 | |
Tssr48526 | 5 | 15 | + | TSS region | transcription start site region 48526 | |
Gm43579 | 5 | 1306 | - | antisense lncRNA gene | predicted gene 43579 | |
Cpgi16506 | 5 | 492 | CpG island | CpG island 16506 | ||
Cfap73 | 5 | 5900 | - | protein coding gene | cilia and flagella associated protein 73 | |
Cpgi16507 | 5 | 401 | CpG island | CpG island 16507 | ||
Tssr1621 | 5 | 10 | - | TSS region | transcription start site region 1621 | |
Tssr52948 | 5 | 10 | - | TSS region | transcription start site region 52948 | |
Tssr52949 | 5 | 12 | - | TSS region | transcription start site region 52949 | |
Tssr48527 | 5 | 11 | + | TSS region | transcription start site region 48527 | |
Tssr48528 | 5 | 11 | + | TSS region | transcription start site region 48528 | |
Tssr48529 | 5 | 7 | + | TSS region | transcription start site region 48529 | |
Tssr48530 | 5 | 7 | + | TSS region | transcription start site region 48530 | |
Cpgi16508 | 5 | 669 | CpG island | CpG island 16508 | ||
Tssr52950 | 5 | 18 | - | TSS region | transcription start site region 52950 | |
Gm42657 | 5 | 210 | + | pseudogene | predicted gene 42657 | |
Gm15749 | 5 | 709 | + | lincRNA gene | predicted gene 15749 | |
Cpgi16509 | 5 | 1054 | CpG island | CpG island 16509 | ||
Rasal1 | 5 | 30785 | + | protein coding gene | RAS protein activator like 1 (GAP1 like) | |
Tssr48531 | 5 | 46 | + | TSS region | transcription start site region 48531 | |
Tssr48532 | 5 | 11 | + | TSS region | transcription start site region 48532 | |
Tssr48533 | 5 | 4 | + | TSS region | transcription start site region 48533 | |
Cpgi16510 | 5 | 167 | CpG island | CpG island 16510 | ||
Tssr48534 | 5 | 8 | + | TSS region | transcription start site region 48534 | |
Tssr48535 | 5 | 7 | + | TSS region | transcription start site region 48535 | |
Dtx1 | 5 | 31466 | - | protein coding gene | deltex 1, E3 ubiquitin ligase | |
Cpgi16511 | 5 | 572 | CpG island | CpG island 16511 | ||
Cpgi16512 | 5 | 326 | CpG island | CpG island 16512 | ||
Tssr52951 | 5 | 52 | - | TSS region | transcription start site region 52951 | |
Tssr52952 | 5 | 47 | - | TSS region | transcription start site region 52952 | |
Tssr52953 | 5 | 21 | - | TSS region | transcription start site region 52953 | |
Cpgi16513 | 5 | 183 | CpG island | CpG island 16513 | ||
Cpgi16514 | 5 | 1346 | CpG island | CpG island 16514 | ||
Tssr52954 | 5 | 13 | - | TSS region | transcription start site region 52954 |