MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:118417793-118537806

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm26455	5	118418727 to 118418818	91	-	miRNA gene	predicted gene, 26455
Tssr52898	5	118422000 to 118422005	5	-	TSS region	transcription start site region 52898
Cpgi16435	5	118422652 to 118422860	208		CpG island	CpG island 16435
Tssr52899	5	118434816 to 118434848	32	-	TSS region	transcription start site region 52899
Tssr48424	5	118435840 to 118435848	8	+	TSS region	transcription start site region 48424
Tssr48425	5	118437485 to 118437495	10	+	TSS region	transcription start site region 48425
Tssr48426	5	118437510 to 118437518	8	+	TSS region	transcription start site region 48426
Gm30746	5	118462049 to 118463084	1035	+	lncRNA gene	predicted gene, 30746
Tssr52900	5	118466469 to 118466485	16	-	TSS region	transcription start site region 52900
Tssr52901	5	118477750 to 118477778	28	-	TSS region	transcription start site region 52901
Tssr52902	5	118477793 to 118477806	13	-	TSS region	transcription start site region 52902
Tssr48427	5	118478580 to 118478591	11	+	TSS region	transcription start site region 48427
Tssr48428	5	118486950 to 118486994	44	+	TSS region	transcription start site region 48428
Gm46921	5	118491256 to 118492630	1374	-	lncRNA gene	predicted gene, 46921
Gm15754	5	118499398 to 118503454	4056	+	pseudogene	predicted gene 15754
D5Mit407	5	118506247 to 118506341	94		DNA segment	DNA Segment, Chr 5 Massachusetts Institute of Technology 407
Cpgi16436	5	118513843 to 118514506	663		CpG island	CpG island 16436
Tssr52903	5	118514030 to 118514045	15	-	TSS region	transcription start site region 52903