Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:118160383-118330443

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm30522 5 118161138 to 118165023 3885 + lncRNA gene predicted gene, 30522
Cpgi16425 5 118169159 to 118170448 1289 CpG island CpG island 16425
Tssr52893 5 118169585 to 118169589 4 - TSS region transcription start site region 52893
Tssr48417 5 118169712 to 118169743 31 + TSS region transcription start site region 48417
Hrk 5 118169764 to 118189478 19714 + protein coding gene harakiri, BCL2 interacting protein (contains only BH3 domain)
Cpgi16426 5 118171263 to 118172536 1273 CpG island CpG island 16426
Rnft2 5 118190734 to 118245111 54377 - protein coding gene ring finger protein, transmembrane 2
Criq2 5 118194514 to 118194514 0 QTL Citrobacter rodentium infection QTL 2
Gm24050 5 118211053 to 118211342 289 - unclassified non-coding RNA gene predicted gene, 24050
Cpgi16427 5 118214410 to 118214845 435 CpG island CpG island 16427
Tssr52894 5 118232435 to 118232465 30 - TSS region transcription start site region 52894
Cpgi16428 5 118244633 to 118245632 999 CpG island CpG island 16428
Tssr52895 5 118244983 to 118245048 65 - TSS region transcription start site region 52895
Tssr48418 5 118245226 to 118245289 63 + TSS region transcription start site region 48418
2410131K14Rik 5 118245227 to 118263114 17887 + protein coding gene RIKEN cDNA 2410131K14 gene
Tssr48419 5 118245301 to 118245358 57 + TSS region transcription start site region 48419
Tssr48420 5 118245383 to 118245443 60 + TSS region transcription start site region 48420
Gm25076 5 118266449 to 118266580 131 + snoRNA gene predicted gene, 25076
Tssr48421 5 118318967 to 118318972 5 + TSS region transcription start site region 48421
Cpgi16429 5 118326996 to 118327225 229 CpG island CpG island 16429