Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:117459903-117859919

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ksr2 5 117414000 to 117775003 361003 + protein coding gene kinase suppressor of ras 2
Gm42013 5 117482507 to 117486260 3753 - lncRNA gene predicted gene, 42013
Tssr52887 5 117484304 to 117484328 24 - TSS region transcription start site region 52887
Cpgi16416 5 117493365 to 117493822 457 CpG island CpG island 16416
Cpgi16417 5 117497057 to 117497428 371 CpG island CpG island 16417
Tssr48394 5 117509800 to 117509807 7 + TSS region transcription start site region 48394
Tssr48395 5 117509942 to 117509954 12 + TSS region transcription start site region 48395
Tssr48396 5 117510243 to 117510250 7 + TSS region transcription start site region 48396
Gm42550 5 117520699 to 117521658 959 + unclassified gene predicted gene 42550
Smmq1 5 117527900 to 117527900 0 QTL soleus muscle mass QTL 1
Tammq2 5 117527900 to 117527900 0 QTL tibialis anterior muscle mass QTL 2
Cpgi16418 5 117555197 to 117555462 265 CpG island CpG island 16418
Tssr48397 5 117659903 to 117659919 16 + TSS region transcription start site region 48397
Tssr48398 5 117769612 to 117769614 2 + TSS region transcription start site region 48398
Tssr48399 5 117781017 to 117781075 58 + TSS region transcription start site region 48399
Nos1 5 117781032 to 117958840 177808 + protein coding gene nitric oxide synthase 1, neuronal
Cpgi16419 5 117841754 to 117842962 1208 CpG island CpG island 16419
Tssr48400 5 117841839 to 117841857 18 + TSS region transcription start site region 48400
Tssr48401 5 117841884 to 117841925 41 + TSS region transcription start site region 48401
Tssr48402 5 117841930 to 117841939 9 + TSS region transcription start site region 48402
Tssr48403 5 117842113 to 117842167 54 + TSS region transcription start site region 48403
Gm30360 5 117857197 to 117879326 22129 - lncRNA gene predicted gene, 30360