MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:117099876-117139897

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Suds3	5	117091678 to 117115993	24315	-	protein coding gene	suppressor of defective silencing 3 homolog (S. cerevisiae)
Cpgi16403	5	117103668 to 117103841	173		CpG island	CpG island 16403
Cpgi16404	5	117115124 to 117116432	1308		CpG island	CpG island 16404
9530046B11Rik	5	117115218 to 117118723	3505	+	antisense lncRNA gene	RIKEN cDNA 9530046B11 gene
Tssr52876	5	117115882 to 117115906	24	-	TSS region	transcription start site region 52876
Tssr52877	5	117115909 to 117115958	49	-	TSS region	transcription start site region 52877
Tssr52878	5	117115972 to 117116010	38	-	TSS region	transcription start site region 52878
Tssr52879	5	117116085 to 117116097	12	-	TSS region	transcription start site region 52879
Cpgi16405	5	117119723 to 117121065	1342		CpG island	CpG island 16405
Tssr52880	5	117119876 to 117119897	21	-	TSS region	transcription start site region 52880
Taok3	5	117120112 to 117275101	154989	+	protein coding gene	TAO kinase 3
Tssr48350	5	117120120 to 117120180	60	+	TSS region	transcription start site region 48350
Tssr48351	5	117120185 to 117120196	11	+	TSS region	transcription start site region 48351
Tssr48352	5	117126262 to 117126324	62	+	TSS region	transcription start site region 48352
Gm43637	5	117130323 to 117133248	2925	+	unclassified gene	predicted gene 43637
Tssr48353	5	117133567 to 117133649	82	+	TSS region	transcription start site region 48353
Cpgi16406	5	117133574 to 117133751	177		CpG island	CpG island 16406
Tssr48354	5	117133652 to 117133663	11	+	TSS region	transcription start site region 48354