Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:116147661-116368644

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13 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ccdc60 5 116125581 to 116289004 163423 - protein coding gene coiled-coil domain containing 60
Gm36552 5 116192711 to 116206698 13987 + lncRNA gene predicted gene, 36552
Tssr48343 5 116230448 to 116230449 1 + TSS region transcription start site region 48343
Gm36502 5 116232070 to 116238073 6003 + lncRNA gene predicted gene, 36502
Gm14507 5 116243706 to 116254953 11247 + antisense lncRNA gene predicted gene 14507
Gm13837 5 116257661 to 116258644 983 + antisense lncRNA gene predicted gene 13837
Tssr52846 5 116288944 to 116288977 33 - TSS region transcription start site region 52846
Tssr52847 5 116288978 to 116288999 21 - TSS region transcription start site region 52847
Tssr52848 5 116289000 to 116289009 9 - TSS region transcription start site region 52848
Gm13839 5 116301300 to 116303514 2214 + lincRNA gene predicted gene 13839
Gm13838 5 116305682 to 116309360 3678 - lincRNA gene predicted gene 13838
B230112J18Rik 5 116312360 to 116318275 5915 + lincRNA gene RIKEN cDNA B230112J18 gene
Cpgi16393 5 116350842 to 116351020 178 CpG island CpG island 16393