Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:115591899-115687158

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gcn1 5 115565254 to 115622654 57400 + protein coding gene GCN1 activator of EIF2AK4
Cpgi16383 5 115602399 to 115602814 415 CpG island CpG island 16383
Tssr48318 5 115605642 to 115605651 9 + TSS region transcription start site region 48318
Tssr48319 5 115610443 to 115610444 1 + TSS region transcription start site region 48319
Tssr48320 5 115611841 to 115611853 12 + TSS region transcription start site region 48320
1110006O24Rik 5 115631049 to 115631816 767 - lincRNA gene RIKEN cDNA 1110006O24 gene
Cpgi16384 5 115631170 to 115632835 1665 CpG island CpG island 16384
Tssr52821 5 115631780 to 115631829 49 - TSS region transcription start site region 52821
Tssr48321 5 115631883 to 115631895 12 + TSS region transcription start site region 48321
Rab35 5 115631899 to 115647158 15259 + protein coding gene RAB35, member RAS oncogene family
Tssr48322 5 115631902 to 115631933 31 + TSS region transcription start site region 48322
Tssr48323 5 115631982 to 115632033 51 + TSS region transcription start site region 48323
Tssr48324 5 115632036 to 115632054 18 + TSS region transcription start site region 48324
Mir7030 5 115645573 to 115645632 59 + miRNA gene microRNA 7030
Bicdl1 5 115648175 to 115731621 83446 - protein coding gene BICD family like cargo adaptor 1
Cpgi16385 5 115652682 to 115653362 680 CpG island CpG island 16385
Tssr52822 5 115652826 to 115652829 3 - TSS region transcription start site region 52822
Tssr52823 5 115652953 to 115652966 13 - TSS region transcription start site region 52823
Tssr52824 5 115652974 to 115652992 18 - TSS region transcription start site region 52824