MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:115273774-115323793

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi16363	5	115279382 to 115280378	996		CpG island	CpG island 16363
Coq5	5	115279666 to 115296972	17306	+	protein coding gene	coenzyme Q5 methyltransferase
Tssr48210	5	115279673 to 115279716	43	+	TSS region	transcription start site region 48210
Tssr48211	5	115279728 to 115279739	11	+	TSS region	transcription start site region 48211
Gm13829	5	115291763 to 115291900	137	-	pseudogene	predicted gene 13829
Dynll1	5	115297110 to 115300990	3880	-	protein coding gene	dynein light chain LC8-type 1
Tssr52775	5	115298774 to 115298793	19	-	TSS region	transcription start site region 52775
Cpgi16364	5	115300245 to 115301621	1376		CpG island	CpG island 16364
Tssr52776	5	115300551 to 115300564	13	-	TSS region	transcription start site region 52776
Tssr52777	5	115300927 to 115300944	17	-	TSS region	transcription start site region 52777
Tssr52778	5	115300957 to 115300968	11	-	TSS region	transcription start site region 52778
Tssr48212	5	115301111 to 115301174	63	+	TSS region	transcription start site region 48212
Gm13830	5	115301120 to 115319208	18088	+	lincRNA gene	predicted gene 13830
Tssr52779	5	115312898 to 115312899	1	-	TSS region	transcription start site region 52779
Tssr48213	5	115312994 to 115313025	31	+	TSS region	transcription start site region 48213
Tssr52780	5	115313760 to 115313772	12	-	TSS region	transcription start site region 52780
Cpgi16365	5	115319520 to 115319888	368		CpG island	CpG island 16365