MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:115197585-115278590

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm35515	5	115194378 to 115205256	10878	+	lncRNA gene	predicted gene, 35515
Gm13828	5	115198343 to 115198705	362	+	pseudogene	predicted gene 13828
Tssr48206	5	115203988 to 115203997	9	+	TSS region	transcription start site region 48206
Cpgi16359	5	115204707 to 115205077	370		CpG island	CpG island 16359
Cpgi16360	5	115235175 to 115236050	875		CpG island	CpG island 16360
Tssr48207	5	115235496 to 115235511	15	+	TSS region	transcription start site region 48207
Tssr48208	5	115235522 to 115235533	11	+	TSS region	transcription start site region 48208
Pop5	5	115235589 to 115240972	5383	+	protein coding gene	processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae)
Cpgi16361	5	115237585 to 115238590	1005		CpG island	CpG island 16361
Tssr48209	5	115238008 to 115238083	75	+	TSS region	transcription start site region 48209
Rnf10	5	115241770 to 115272895	31125	-	protein coding gene	ring finger protein 10
Gm13831	5	115263093 to 115263394	301	+	pseudogene	predicted gene 13831
Tssr52771	5	115267178 to 115267181	3	-	TSS region	transcription start site region 52771
D5Mit318	5	115271579 to 115271655	76		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 318
Cpgi16362	5	115272006 to 115273041	1035		CpG island	CpG island 16362
Tssr52772	5	115272381 to 115272441	60	-	TSS region	transcription start site region 52772
Tssr52773	5	115272485 to 115272524	39	-	TSS region	transcription start site region 52773
Tssr52774	5	115272883 to 115272903	20	-	TSS region	transcription start site region 52774