Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:114688587-114748746

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gltp 5 114669490 to 114690935 21445 - protein coding gene glycolipid transfer protein
Cpgi16330 5 114690544 to 114691573 1029 CpG island CpG island 16330
Tssr52720 5 114690864 to 114690902 38 - TSS region transcription start site region 52720
Tssr52721 5 114690906 to 114690970 64 - TSS region transcription start site region 52721
Tssr52722 5 114690974 to 114690999 25 - TSS region transcription start site region 52722
Tssr52723 5 114691016 to 114691027 11 - TSS region transcription start site region 52723
Gm34931 5 114696983 to 114707819 10836 - lncRNA gene predicted gene, 34931
Cpgi16331 5 114697032 to 114697287 255 CpG island CpG island 16331
Cpgi16332 5 114707447 to 114708178 731 CpG island CpG island 16332
Tchp 5 114707765 to 114722327 14562 + protein coding gene trichoplein, keratin filament binding
Tssr48096 5 114707777 to 114707866 89 + TSS region transcription start site region 48096
Tssr1605 5 114707916 to 114707928 12 + TSS region transcription start site region 1605
Gm42789 5 114715554 to 114716120 566 - antisense lncRNA gene predicted gene 42789
Cpgi16333 5 114718587 to 114718746 159 CpG island CpG island 16333
Mir7028 5 114719515 to 114719578 63 + miRNA gene microRNA 7028
Git2 5 114727408 to 114773522 46114 - protein coding gene GIT ArfGAP 2
Tssr52724 5 114730354 to 114730378 24 - TSS region transcription start site region 52724
Tssr52725 5 114733286 to 114733314 28 - TSS region transcription start site region 52725
Tssr52726 5 114744831 to 114744832 1 - TSS region transcription start site region 52726