Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:114169245-114409258

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Acacb 5 114146535 to 114250761 104226 + protein coding gene acetyl-Coenzyme A carboxylase beta
Cpgi16311 5 114175692 to 114176415 723 CpG island CpG island 16311
Tssr48074 5 114175889 to 114175938 49 + TSS region transcription start site region 48074
Tssr48075 5 114212044 to 114212049 5 + TSS region transcription start site region 48075
Gm13784 5 114237176 to 114237925 749 - pseudogene predicted gene 13784
Tssr48076 5 114248260 to 114248288 28 + TSS region transcription start site region 48076
Foxn4 5 114254164 to 114273807 19643 - protein coding gene forkhead box N4
Cpgi16312 5 114268342 to 114268505 163 CpG island CpG island 16312
Tssr52697 5 114271162 to 114271164 2 - TSS region transcription start site region 52697
Cpgi16313 5 114273633 to 114274670 1037 CpG island CpG island 16313
Tssr52698 5 114273772 to 114273786 14 - TSS region transcription start site region 52698
Tssr1601 5 114273790 to 114273802 12 - TSS region transcription start site region 1601
Tssr52699 5 114273833 to 114273838 5 - TSS region transcription start site region 52699
Tssr52700 5 114274033 to 114274081 48 - TSS region transcription start site region 52700
Tssr52701 5 114274245 to 114274269 24 - TSS region transcription start site region 52701
Myo1h 5 114288899 to 114364576 75677 + protein coding gene myosin 1H
Cpgi16314 5 114289108 to 114289316 208 CpG island CpG island 16314
Tssr48077 5 114289245 to 114289258 13 + TSS region transcription start site region 48077
Tssr48078 5 114289268 to 114289278 10 + TSS region transcription start site region 48078
Cpgi16315 5 114309563 to 114309805 242 CpG island CpG island 16315
Cpgi16316 5 114314799 to 114315050 251 CpG island CpG island 16316
Tssr48079 5 114323346 to 114323358 12 + TSS region transcription start site region 48079
Kctd10 5 114363572 to 114380505 16933 - protein coding gene potassium channel tetramerisation domain containing 10
Tssr52702 5 114372277 to 114372289 12 - TSS region transcription start site region 52702
Tssr52703 5 114372625 to 114372656 31 - TSS region transcription start site region 52703
Tssr48080 5 114374793 to 114374798 5 + TSS region transcription start site region 48080
Cpgi16317 5 114374850 to 114375216 366 CpG island CpG island 16317
Tssr52704 5 114374990 to 114374996 6 - TSS region transcription start site region 52704
Tssr48081 5 114378943 to 114378957 14 + TSS region transcription start site region 48081
Tssr1602 5 114379078 to 114379106 28 - TSS region transcription start site region 1602
Cpgi16318 5 114379874 to 114381340 1466 CpG island CpG island 16318
Tssr1603 5 114380051 to 114380070 19 + TSS region transcription start site region 1603
Tssr52705 5 114380448 to 114380454 6 - TSS region transcription start site region 52705
Tssr52706 5 114380459 to 114380487 28 - TSS region transcription start site region 52706
Tssr52707 5 114380488 to 114380497 9 - TSS region transcription start site region 52707
Tssr52708 5 114380505 to 114380520 15 - TSS region transcription start site region 52708
Tssr48082 5 114380591 to 114380612 21 + TSS region transcription start site region 48082
Ube3b 5 114380607 to 114421169 40562 + protein coding gene ubiquitin protein ligase E3B
Tssr48083 5 114380815 to 114380851 36 + TSS region transcription start site region 48083
Mir7027 5 114404468 to 114404539 71 + miRNA gene microRNA 7027
Tssr48084 5 114406770 to 114406787 17 + TSS region transcription start site region 48084
Tssr48085 5 114408084 to 114408097 13 + TSS region transcription start site region 48085