MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:112560772-112721515

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Sez6l	5	112419151 to 112577185	158034	-	protein coding gene	seizure related 6 homolog like
Cpgi16271	5	112576344 to 112577782	1438		CpG island	CpG island 16271
Tssr48003	5	112576435 to 112576443	8	+	TSS region	transcription start site region 48003
Tssr52576	5	112577149 to 112577177	28	-	TSS region	transcription start site region 52576
Tssr52577	5	112577186 to 112577204	18	-	TSS region	transcription start site region 52577
Tssr52578	5	112577906 to 112577925	19	-	TSS region	transcription start site region 52578
Gm27004	5	112582645 to 112583371	726	+	lincRNA gene	predicted gene, 27004
1700034G24Rik	5	112582936 to 112589996	7060	-	lincRNA gene	RIKEN cDNA 1700034G24 gene
Tssr52579	5	112589990 to 112590002	12	-	TSS region	transcription start site region 52579
Tssr52580	5	112590007 to 112590015	8	-	TSS region	transcription start site region 52580
Tssr52581	5	112590017 to 112590022	5	-	TSS region	transcription start site region 52581
Cpgi16272	5	112625434 to 112626079	645		CpG island	CpG island 16272
4933415J04Rik	5	112640335 to 112641635	1300	+	unclassified gene	RIKEN cDNA 4933415J04 gene
Cpgi16273	5	112640772 to 112641515	743		CpG island	CpG island 16273
Gm30529	5	112643830 to 112680538	36708	+	lncRNA gene	predicted gene, 30529
Gm42864	5	112649367 to 112652112	2745	+	lincRNA gene	predicted gene 42864
Gm42865	5	112675375 to 112680587	5212	+	lincRNA gene	predicted gene 42865
Myo18b	5	112688876 to 112896362	207486	-	protein coding gene	myosin XVIIIb
Cpgi16274	5	112692626 to 112692780	154		CpG island	CpG island 16274