MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:112414151-112582185

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Sez6l	5	112419151 to 112577185	158034	-	protein coding gene	seizure related 6 homolog like
Cpgi16266	5	112419655 to 112419826	171		CpG island	CpG island 16266
Tssr52572	5	112419974 to 112419980	6	-	TSS region	transcription start site region 52572
Cpgi16267	5	112428890 to 112429268	378		CpG island	CpG island 16267
Tssr48001	5	112449405 to 112449414	9	+	TSS region	transcription start site region 48001
Gm6588	5	112449426 to 112451738	2312	+	protein coding gene	predicted gene 6588
Cpgi16268	5	112475021 to 112475452	431		CpG island	CpG island 16268
Tssr52573	5	112475775 to 112475780	5	-	TSS region	transcription start site region 52573
Tssr52574	5	112475866 to 112475875	9	-	TSS region	transcription start site region 52574
Tssr48002	5	112476353 to 112476399	46	+	TSS region	transcription start site region 48002
Gm42160	5	112476850 to 112479355	2505	+	lncRNA gene	predicted gene, 42160
Tssr52575	5	112522587 to 112522589	2	-	TSS region	transcription start site region 52575
Cpgi16269	5	112527122 to 112527292	170		CpG island	CpG island 16269
Cpgi16270	5	112552810 to 112553027	217		CpG island	CpG island 16270
Cpgi16271	5	112576344 to 112577782	1438		CpG island	CpG island 16271
Tssr48003	5	112576435 to 112576443	8	+	TSS region	transcription start site region 48003
Tssr52576	5	112577149 to 112577177	28	-	TSS region	transcription start site region 52576
Tssr52577	5	112577186 to 112577204	18	-	TSS region	transcription start site region 52577
Tssr52578	5	112577906 to 112577925	19	-	TSS region	transcription start site region 52578