Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:112375866-112575875

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hps4 5 112343083 to 112378414 35331 + protein coding gene HPS4, biogenesis of lysosomal organelles complex 3 subunit 2
Gm42158 5 112378415 to 112383911 5496 - lncRNA gene predicted gene, 42158
Asphd2 5 112384354 to 112394866 10512 - protein coding gene aspartate beta-hydroxylase domain containing 2
Cpgi16264 5 112391744 to 112391926 182 CpG island CpG island 16264
Cpgi16265 5 112394229 to 112395510 1281 CpG island CpG island 16265
Tssr52570 5 112394813 to 112394832 19 - TSS region transcription start site region 52570
Tssr52571 5 112394836 to 112394880 44 - TSS region transcription start site region 52571
Sez6l 5 112419151 to 112577185 158034 - protein coding gene seizure related 6 homolog like
Cpgi16266 5 112419655 to 112419826 171 CpG island CpG island 16266
Tssr52572 5 112419974 to 112419980 6 - TSS region transcription start site region 52572
Cpgi16267 5 112428890 to 112429268 378 CpG island CpG island 16267
Tssr48001 5 112449405 to 112449414 9 + TSS region transcription start site region 48001
Gm6588 5 112449426 to 112451738 2312 + protein coding gene predicted gene 6588
Cpgi16268 5 112475021 to 112475452 431 CpG island CpG island 16268
Tssr52573 5 112475775 to 112475780 5 - TSS region transcription start site region 52573
Tssr52574 5 112475866 to 112475875 9 - TSS region transcription start site region 52574
Tssr48002 5 112476353 to 112476399 46 + TSS region transcription start site region 48002
Gm42160 5 112476850 to 112479355 2505 + lncRNA gene predicted gene, 42160
Tssr52575 5 112522587 to 112522589 2 - TSS region transcription start site region 52575
Cpgi16269 5 112527122 to 112527292 170 CpG island CpG island 16269
Cpgi16270 5 112552810 to 112553027 217 CpG island CpG island 16270