MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:112369229-112420510

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14 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Hps4	5	112343083 to 112378414	35331	+	protein coding gene	HPS4, biogenesis of lysosomal organelles complex 3 subunit 2
Cpgi16262	5	112370055 to 112370227	172		CpG island	CpG island 16262
Cpgi16263	5	112370486 to 112370736	250		CpG island	CpG island 16263
Gm43758	5	112372585 to 112372951	366	-	unclassified gene	predicted gene 43758
Gm20636	5	112374369 to 112375234	865	-	antisense lncRNA gene	predicted gene 20636
Gm42158	5	112378415 to 112383911	5496	-	lncRNA gene	predicted gene, 42158
Asphd2	5	112384354 to 112394866	10512	-	protein coding gene	aspartate beta-hydroxylase domain containing 2
Cpgi16264	5	112391744 to 112391926	182		CpG island	CpG island 16264
Cpgi16265	5	112394229 to 112395510	1281		CpG island	CpG island 16265
Tssr52570	5	112394813 to 112394832	19	-	TSS region	transcription start site region 52570
Tssr52571	5	112394836 to 112394880	44	-	TSS region	transcription start site region 52571
Sez6l	5	112419151 to 112577185	158034	-	protein coding gene	seizure related 6 homolog like
Cpgi16266	5	112419655 to 112419826	171		CpG island	CpG island 16266
Tssr52572	5	112419974 to 112419980	6	-	TSS region	transcription start site region 52572