MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:112318010-112368050

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi16259	5	112324680 to 112324939	259		CpG island	CpG island 16259
Tssr47995	5	112325440 to 112325452	12	+	TSS region	transcription start site region 47995
Cpgi16260	5	112326028 to 112326923	895		CpG island	CpG island 16260
Tssr52566	5	112326236 to 112326267	31	-	TSS region	transcription start site region 52566
Tssr47996	5	112326352 to 112326426	74	+	TSS region	transcription start site region 47996
Tfip11	5	112326369 to 112338073	11704	+	protein coding gene	tuftelin interacting protein 11
Tssr47997	5	112326428 to 112326442	14	+	TSS region	transcription start site region 47997
Tssr47998	5	112326802 to 112326816	14	+	TSS region	transcription start site region 47998
Srrd	5	112337392 to 112343040	5648	-	protein coding gene	SRR1 domain containing
Cpgi16261	5	112342335 to 112343598	1263		CpG island	CpG island 16261
Tssr52567	5	112342971 to 112342986	15	-	TSS region	transcription start site region 52567
Tssr52568	5	112343010 to 112343050	40	-	TSS region	transcription start site region 52568
Tssr47999	5	112343068 to 112343138	70	+	TSS region	transcription start site region 47999
Hps4	5	112343083 to 112378414	35331	+	protein coding gene	HPS4, biogenesis of lysosomal organelles complex 3 subunit 2
Tssr52569	5	112343469 to 112343505	36	-	TSS region	transcription start site region 52569
Tssr48000	5	112344700 to 112344738	38	+	TSS region	transcription start site region 48000
Gm6583	5	112353801 to 112356033	2232	-	protein coding gene	predicted gene 6583
Gm43759	5	112367212 to 112368472	1260	+	unclassified gene	predicted gene 43759