MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:110430755-110532201

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Fbrsl1	5	110361754 to 110448503	86749	-	protein coding gene	fibrosin-like 1
Tssr1585	5	110446912 to 110446913	1	+	TSS region	transcription start site region 1585
Cpgi16230	5	110447286 to 110449206	1920		CpG island	CpG island 16230
Tssr1586	5	110447967 to 110447969	2	+	TSS region	transcription start site region 1586
Gm42596	5	110447989 to 110449946	1957	+	antisense lncRNA gene	predicted gene 42596
Tssr47895	5	110448341 to 110448357	16	+	TSS region	transcription start site region 47895
Tssr52508	5	110448439 to 110448454	15	-	TSS region	transcription start site region 52508
Tssr52509	5	110448472 to 110448481	9	-	TSS region	transcription start site region 52509
Tssr52510	5	110448486 to 110448519	33	-	TSS region	transcription start site region 52510
Tssr52511	5	110448521 to 110448532	11	-	TSS region	transcription start site region 52511
Tssr47896	5	110467234 to 110467261	27	+	TSS region	transcription start site region 47896
Tssr52512	5	110471297 to 110471324	27	-	TSS region	transcription start site region 52512
Cpgi16231	5	110480662 to 110481852	1190		CpG island	CpG island 16231
Gm32996	5	110480755 to 110482201	1446	-	pseudogene	predicted gene, 32996
Tssr47897	5	110514857 to 110514879	22	+	TSS region	transcription start site region 47897
Tssr47898	5	110514885 to 110514931	46	+	TSS region	transcription start site region 47898
A630023P12Rik	5	110514923 to 110525980	11057	+	lincRNA gene	RIKEN cDNA A630023P12 gene
Tssr47899	5	110514934 to 110514949	15	+	TSS region	transcription start site region 47899