Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:110201002-110311014

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Golga3 5 110176701 to 110226470 49769 + protein coding gene golgi autoantigen, golgin subfamily a, 3
Tssr47880 5 110204774 to 110204808 34 + TSS region transcription start site region 47880
Gm43138 5 110206580 to 110207287 707 + sense intronic lncRNA gene predicted gene 43138
5930411N13Rik 5 110227401 to 110230719 3318 - lncRNA gene RIKEN cDNA 5930411N13 gene
Cpgi16224 5 110230547 to 110231576 1029 CpG island CpG island 16224
Gm43137 5 110230608 to 110231201 593 - antisense lncRNA gene predicted gene 43137
Tssr52497 5 110230860 to 110230919 59 - TSS region transcription start site region 52497
Tssr47881 5 110230975 to 110231099 124 + TSS region transcription start site region 47881
Ankle2 5 110231004 to 110256651 25647 + protein coding gene ankyrin repeat and LEM domain containing 2
Tssr47882 5 110231117 to 110231133 16 + TSS region transcription start site region 47882
Tssr1583 5 110231140 to 110231165 25 + TSS region transcription start site region 1583
Tssr47883 5 110256002 to 110256014 12 + TSS region transcription start site region 47883
Pgam5 5 110259135 to 110269899 10764 - protein coding gene phosphoglycerate mutase family member 5
Gm26718 5 110259163 to 110269847 10684 + lincRNA gene predicted gene, 26718
Tssr47884 5 110261474 to 110261479 5 + TSS region transcription start site region 47884
Gm15788 5 110262161 to 110277267 15106 + antisense lncRNA gene predicted gene 15788
Cpgi16225 5 110269220 to 110270014 794 CpG island CpG island 16225
Tssr52498 5 110269816 to 110269894 78 - TSS region transcription start site region 52498
Pxmp2 5 110274286 to 110286168 11882 - protein coding gene peroxisomal membrane protein 2
Cpgi16226 5 110285641 to 110286751 1110 CpG island CpG island 16226
Tssr52499 5 110286010 to 110286028 18 - TSS region transcription start site region 52499
Tssr52500 5 110286043 to 110286052 9 - TSS region transcription start site region 52500
Tssr52501 5 110286146 to 110286155 9 - TSS region transcription start site region 52501
Tssr52502 5 110286159 to 110286177 18 - TSS region transcription start site region 52502
Pole 5 110286319 to 110337468 51149 + protein coding gene polymerase (DNA directed), epsilon
Tssr47885 5 110286326 to 110286391 65 + TSS region transcription start site region 47885
Tssr47886 5 110308801 to 110308806 5 + TSS region transcription start site region 47886