MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:109645990-109841886

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13 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
5430403G16Rik	5	109674545 to 109691041	16496	-	protein coding gene	RIKEN cDNA 5430403G16 gene
Afw16	5	109682300 to 109682419	119		QTL	abdominal fat weight QTL 16
D5Mit314	5	109682300 to 109682419	119		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 314
Cpgi16216	5	109690646 to 109690843	197		CpG island	CpG island 16216
Tssr52477	5	109690786 to 109690813	27	-	TSS region	transcription start site region 52477
Tssr52478	5	109690819 to 109690857	38	-	TSS region	transcription start site region 52478
4930522L14Rik	5	109735990 to 109751886	15896	-	protein coding gene	RIKEN cDNA 4930522L14 gene
Tssr52479	5	109751658 to 109751719	61	-	TSS region	transcription start site region 52479
Gm8508	5	109757525 to 109757887	362	-	pseudogene	predicted gene 8508
A430073D23Rik	5	109769407 to 109796298	26891	-	lincRNA gene	RIKEN cDNA A430073D23 gene
Cpgi16217	5	109795997 to 109796257	260		CpG island	CpG island 16217
Tssr52480	5	109796270 to 109796286	16	-	TSS region	transcription start site region 52480
Gm10416	5	109833501 to 109834142	641	-	pseudogene	predicted pseudogene 10416