MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:108890679-109140710

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Vmn2r-ps21	5	108873215 to 108892353	19138	-	pseudogene	vomeronasal 2, receptor, pseudogene 21
Cpgi16210	5	108903219 to 108903529	310		CpG island	CpG island 16210
Gm42627	5	108903226 to 108903449	223	+	pseudogene	predicted gene 42627
Gm20629	5	108943914 to 108949415	5501	+	antisense lncRNA gene	predicted gene 20629
Gm18971	5	108971677 to 108972050	373	+	pseudogene	predicted gene, 18971
Gm18595	5	108972806 to 108975895	3089	+	pseudogene	predicted gene, 18595
Vmn2r10	5	108995539 to 109006436	10897	-	protein coding gene	vomeronasal 2, receptor 10
Tssr52466	5	109015679 to 109015710	31	-	TSS region	transcription start site region 52466
Gm5871	5	109016198 to 109016915	717	-	pseudogene	predicted gene 5871
Tssr52467	5	109016922 to 109016941	19	-	TSS region	transcription start site region 52467
Vmn2r11	5	109046873 to 109059452	12579	-	protein coding gene	vomeronasal 2, receptor 11
Tssr47856	5	109055618 to 109055629	11	+	TSS region	transcription start site region 47856
Tssr47857	5	109055643 to 109055653	10	+	TSS region	transcription start site region 47857
Tssr47858	5	109055715 to 109055720	5	+	TSS region	transcription start site region 47858
Vmn2r12	5	109085849 to 109097864	12015	-	protein coding gene	vomeronasal 2, receptor 12
D5Mit240	5	109090758 to 109090907	149		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 240
Hypch	5	109090758 to 139133150	30042392		QTL	hypercholesterolemia