Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:108695352-108895374

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fgfrl1 5 108694229 to 108706950 12721 + protein coding gene fibroblast growth factor receptor-like 1
Tssr47854 5 108704566 to 108704596 30 + TSS region transcription start site region 47854
Rnf212 5 108729290 to 108774982 45692 - protein coding gene ring finger protein 212
Tssr52461 5 108750957 to 108750995 38 - TSS region transcription start site region 52461
Tssr52462 5 108760055 to 108760069 14 - TSS region transcription start site region 52462
Gm46931 5 108760188 to 108763210 3022 + pseudogene predicted gene, 46931
Tssr47855 5 108762559 to 108762564 5 + TSS region transcription start site region 47855
1700047L14Rik 5 108763842 to 108768914 5072 + antisense lncRNA gene RIKEN cDNA 1700047L14 gene
Cpgi16209 5 108774716 to 108775266 550 CpG island CpG island 16209
Tssr52463 5 108775021 to 108775032 11 - TSS region transcription start site region 52463
Tmed11 5 108777235 to 108795363 18128 - protein coding gene transmembrane p24 trafficking protein 11
Tssr52464 5 108795345 to 108795351 6 - TSS region transcription start site region 52464
Tssr52465 5 108795352 to 108795374 22 - TSS region transcription start site region 52465
Vmn2r8 5 108797193 to 108808754 11561 - protein coding gene vomeronasal 2, receptor 8
Gm18594 5 108821721 to 108823123 1402 + pseudogene predicted gene, 18594
Vmn2r9 5 108842947 to 108852510 9563 - protein coding gene vomeronasal 2, receptor 9
Gm10417 5 108864833 to 108868354 3521 + protein coding gene predicted gene 10417
Vmn2r-ps21 5 108873215 to 108892353 19138 - pseudogene vomeronasal 2, receptor, pseudogene 21