MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:107904815-108064907

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Rpl5	5	107900528 to 107909005	8477	+	protein coding gene	ribosomal protein L5
Tssr47797	5	107905175 to 107905178	3	+	TSS region	transcription start site region 47797
Gm22270	5	107905177 to 107905308	131	+	snoRNA gene	predicted gene, 22270
Tssr47798	5	107905344 to 107905353	9	+	TSS region	transcription start site region 47798
Gm26387	5	107907345 to 107907476	131	+	snoRNA gene	predicted gene, 26387
Dipk1a	5	107908053 to 107987085	79032	-	protein coding gene	divergent protein kinase domain 1A
Tssr47799	5	107941487 to 107941513	26	+	TSS region	transcription start site region 47799
Tssr52403	5	107967796 to 107967800	4	-	TSS region	transcription start site region 52403
Tssr52404	5	107972864 to 107972879	15	-	TSS region	transcription start site region 52404
Tssr52405	5	107976220 to 107976223	3	-	TSS region	transcription start site region 52405
D5Mit382	5	107984815 to 107984907	92		DNA segment	DNA Segment, Chr 5, Massachusetts Institute of Technology-382
Cpgi16193	5	107986291 to 107987867	1576		CpG island	CpG island 16193
Tssr52406	5	107987003 to 107987055	52	-	TSS region	transcription start site region 52406
Gm42150	5	107991420 to 108002804	11384	-	lncRNA gene	predicted gene, 42150
Tssr47800	5	108001205 to 108001220	15	+	TSS region	transcription start site region 47800
Gm9850	5	108002260 to 108002486	226	+	pseudogene	predicted gene 9850
Rps19-ps8	5	108055495 to 108055916	421	-	pseudogene	ribosomal protein S19, pseudogene 8
Tssr47801	5	108060733 to 108060749	16	+	TSS region	transcription start site region 47801