MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:107487621-107600596

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Btbd8	5	107437997 to 107491596	53599	+	protein coding gene	BTB (POZ) domain containing 8
Tssr47772	5	107497718 to 107497759	41	+	TSS region	transcription start site region 47772
A830010M20Rik	5	107497745 to 107512556	14811	+	protein coding gene	RIKEN cDNA A830010M20 gene
Tssr47773	5	107497762 to 107497802	40	+	TSS region	transcription start site region 47773
Tssr47774	5	107497874 to 107497885	11	+	TSS region	transcription start site region 47774
Gm42669	5	107507621 to 107580596	72975	+	protein coding gene	predicted gene 42669
1700028K03Rik	5	107534711 to 107551542	16831	+	protein coding gene	RIKEN cDNA 1700028K03 gene
Tssr47775	5	107534715 to 107534732	17	+	TSS region	transcription start site region 47775
Tssr47776	5	107534738 to 107534761	23	+	TSS region	transcription start site region 47776
Glmn	5	107548967 to 107597888	48921	-	protein coding gene	glomulin, FKBP associated protein
Cpgi16186	5	107597213 to 107598152	939		CpG island	CpG island 16186
Rpap2	5	107597373 to 107661838	64465	+	protein coding gene	RNA polymerase II associated protein 2
Tssr52377	5	107597533 to 107597545	12	-	TSS region	transcription start site region 52377
Tssr52378	5	107597595 to 107597625	30	-	TSS region	transcription start site region 52378
Tssr47777	5	107597696 to 107597731	35	+	TSS region	transcription start site region 47777
Tssr47778	5	107597741 to 107597756	15	+	TSS region	transcription start site region 47778
Tssr47779	5	107597760 to 107597784	24	+	TSS region	transcription start site region 47779