MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:106255362-106455684

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm38433	5	106272238 to 106272871	633	+	pseudogene	predicted gene, 38433
Tssr47753	5	106294152 to 106294159	7	+	TSS region	transcription start site region 47753
Gm32973	5	106295339 to 106322494	27155	-	lncRNA gene	predicted gene, 32973
Gm32921	5	106321340 to 106323217	1877	+	lincRNA gene	predicted gene, 32921
Tssr47754	5	106351507 to 106351521	14	+	TSS region	transcription start site region 47754
Tssr47755	5	106351528 to 106351552	24	+	TSS region	transcription start site region 47755
4930458A03Rik	5	106351535 to 106364234	12699	+	lincRNA gene	RIKEN cDNA 4930458A03 gene
Tssr1576	5	106351566 to 106351573	7	+	TSS region	transcription start site region 1576
Cpgi16160	5	106353715 to 106353909	194		CpG island	CpG island 16160
Gm42915	5	106355362 to 106355684	322	-	pseudogene	predicted gene 42915
Cpgi16161	5	106363706 to 106363979	273		CpG island	CpG island 16161
4930432H08Rik	5	106364561 to 106366849	2288	-	lincRNA gene	RIKEN cDNA 4930432H08 gene
Gm42916	5	106369012 to 106370818	1806	+	lincRNA gene	predicted gene 42916
Tssr1577	5	106445296 to 106445298	2	-	TSS region	transcription start site region 1577
Cpgi16162	5	106448173 to 106448712	539		CpG island	CpG island 16162
Cpgi16163	5	106451806 to 106452250	444		CpG island	CpG island 16163
Barhl2	5	106452523 to 106458166	5643	-	protein coding gene	BarH like homeobox 2
D5Mit1002	5	106452954 to 106453103	149		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 1002
Cpgi16164	5	106453262 to 106453927	665		CpG island	CpG island 16164