MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:99719437-99939462

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Alg6	4	99715664 to 99763460	47796	+	protein coding gene	asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase)
Itgb3bp	4	99765402 to 99829172	63770	-	protein coding gene	integrin beta 3 binding protein (beta3-endonexin)
Cpgi14489	4	99829049 to 99829772	723		CpG island	CpG island 14489
Tssr42534	4	99829122 to 99829179	57	-	TSS region	transcription start site region 42534
Tssr42535	4	99829180 to 99829191	11	-	TSS region	transcription start site region 42535
Tssr42536	4	99829362 to 99829395	33	-	TSS region	transcription start site region 42536
Tssr37943	4	99829437 to 99829462	25	+	TSS region	transcription start site region 37943
Efcab7	4	99829500 to 99912785	83285	+	protein coding gene	EF-hand calcium binding domain 7
Tssr37944	4	99909793 to 99909799	6	+	TSS region	transcription start site region 37944
Gm26425	4	99909797 to 99909878	81	+	snRNA gene	predicted gene, 26425
Cpgi14490	4	99929310 to 99930248	938		CpG island	CpG island 14490
Tssr42537	4	99929315 to 99929324	9	-	TSS region	transcription start site region 42537
Tssr37945	4	99929431 to 99929438	7	+	TSS region	transcription start site region 37945
Tssr37946	4	99929444 to 99929532	88	+	TSS region	transcription start site region 37946
Pgm1	4	99929451 to 99987294	57843	+	protein coding gene	phosphoglucomutase 1
Tssr37947	4	99929533 to 99929544	11	+	TSS region	transcription start site region 37947
BC062258	4	99929818 to 99932327	2509	+	lncRNA gene	cDNA sequence BC062258