Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:98117208-98527899

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nfia 4 97772734 to 98118874 346140 + protein coding gene nuclear factor I/A
Gm34784 4 98125654 to 98131273 5619 + lncRNA gene predicted gene, 34784
Gm12691 4 98146065 to 98150261 4196 - pseudogene predicted gene 12691
D4Mit303 4 98210228 to 98210348 120 DNA segment DNA Segment, Chr 4, Massachusetts Institute of Technology 303
Gm12692 4 98234745 to 98235289 544 - pseudogene predicted gene 12692
Tssr42508 4 98235367 to 98235387 20 - TSS region transcription start site region 42508
Gm12787 4 98268083 to 98268575 492 - pseudogene predicted gene 12787
Gm24203 4 98275725 to 98275838 113 + unclassified non-coding RNA gene predicted gene, 24203
0610025J13Rik 4 98321398 to 98331791 10393 + antisense lncRNA gene RIKEN cDNA 0610025J13 gene
Cpgi14468 4 98322208 to 98322899 691 CpG island CpG island 14468
Edlmmq3 4 98325754 to 98325754 0 QTL extensor digitorum longus muscle mass QTL 3
Gm12788 4 98352427 to 98352734 307 + pseudogene predicted gene 12788
Tm2d1 4 98355370 to 98383279 27909 - protein coding gene TM2 domain containing 1
Cpgi14469 4 98382773 to 98383392 619 CpG island CpG island 14469
Tssr42509 4 98383232 to 98383280 48 - TSS region transcription start site region 42509
Gm24960 4 98383402 to 98383491 89 - snRNA gene predicted gene, 24960
Cpgi14470 4 98395527 to 98396436 909 CpG island CpG island 14470
Tssr37875 4 98395768 to 98395796 28 + TSS region transcription start site region 37875
Patj 4 98395785 to 98719603 323818 + protein coding gene PATJ, crumbs cell polarity complex component
Tssr37876 4 98395817 to 98395888 71 + TSS region transcription start site region 37876
Tssr37877 4 98395891 to 98395908 17 + TSS region transcription start site region 37877
Tssr37878 4 98396378 to 98396408 30 + TSS region transcription start site region 37878
Tssr37879 4 98436804 to 98436820 16 + TSS region transcription start site region 37879
Tssr37880 4 98436859 to 98436877 18 + TSS region transcription start site region 37880
Tssr37881 4 98436907 to 98436961 54 + TSS region transcription start site region 37881
Tssr37882 4 98436964 to 98436971 7 + TSS region transcription start site region 37882
Tssr37883 4 98437168 to 98437218 50 + TSS region transcription start site region 37883
Tssr37884 4 98437310 to 98437317 7 + TSS region transcription start site region 37884
Tssr37885 4 98437322 to 98437346 24 + TSS region transcription start site region 37885