Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:82525900-82885909

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi14400 4 82536561 to 82537169 608 CpG island CpG island 14400
Cpgi14401 4 82537439 to 82537626 187 CpG island CpG island 14401
Tssr37685 4 82537643 to 82537649 6 + TSS region transcription start site region 37685
Gm11266 4 82540511 to 82547295 6784 + antisense lncRNA gene predicted gene 11266
Tssr42260 4 82561690 to 82561692 2 - TSS region transcription start site region 42260
Gm11267 4 82585048 to 82587319 2271 - sense intronic lncRNA gene predicted gene 11267
Tssr1214 4 82591220 to 82591223 3 + TSS region transcription start site region 1214
Gm42305 4 82605505 to 82606917 1412 + lncRNA gene predicted gene, 42305
n-THgtg10 4 82619623 to 82619694 71 - tRNA gene nuclear encoded tRNA histidine 10 (anticodon GTG)
D4Mit299 4 82638138 to 82638224 86 DNA segment DNA Segment, Chr 4, Massachusetts Institute of Technology 299
Gm11268 4 82642400 to 82642666 266 + pseudogene predicted gene 11268
Tssr42261 4 82687821 to 82687822 1 - TSS region transcription start site region 42261
Tssr37686 4 82692751 to 82692767 16 + TSS region transcription start site region 37686
Tssr37687 4 82692768 to 82692776 8 + TSS region transcription start site region 37687
Gm11269 4 82692805 to 82693711 906 + antisense lncRNA gene predicted gene 11269
Tssr42262 4 82705623 to 82705637 14 - TSS region transcription start site region 42262
Tssr42263 4 82705640 to 82705659 19 - TSS region transcription start site region 42263
Tssr42264 4 82705662 to 82705703 41 - TSS region transcription start site region 42264
Tssr42265 4 82705735 to 82705754 19 - TSS region transcription start site region 42265
Tssr42266 4 82705900 to 82705909 9 - TSS region transcription start site region 42266
Cpgi14402 4 82734791 to 82734982 191 CpG island CpG island 14402
Zdhhc21 4 82798738 to 82859944 61206 - protein coding gene zinc finger, DHHC domain containing 21
Cytrq1 4 82799849 to 82799849 0 QTL cytokine response QTL 1
Tssr42267 4 82800259 to 82800279 20 - TSS region transcription start site region 42267
Tssr42268 4 82850642 to 82850659 17 - TSS region transcription start site region 42268
Tssr42269 4 82850698 to 82850706 8 - TSS region transcription start site region 42269
Tssr42270 4 82850721 to 82850733 12 - TSS region transcription start site region 42270
Cpgi14403 4 82859124 to 82859986 862 CpG island CpG island 14403
Tssr42271 4 82859516 to 82859570 54 - TSS region transcription start site region 42271
Tssr42272 4 82859571 to 82859679 108 - TSS region transcription start site region 42272
Tssr42273 4 82859796 to 82859817 21 - TSS region transcription start site region 42273
Tssr42274 4 82859830 to 82859855 25 - TSS region transcription start site region 42274
Cer1 4 82881751 to 82885148 3397 - protein coding gene cerberus 1, DAN family BMP antagonist
Tssr1215 4 82882647 to 82882650 3 - TSS region transcription start site region 1215
Tssr42275 4 82882812 to 82882827 15 - TSS region transcription start site region 42275
Tssr42276 4 82885103 to 82885110 7 - TSS region transcription start site region 42276
Tssr42277 4 82885147 to 82885152 5 - TSS region transcription start site region 42277