Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:77904858-79416588

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ptprd 4 75941237 to 78211895 2270658 - protein coding gene protein tyrosine phosphatase, receptor type, D
Tssr42199 4 77905018 to 77905031 13 - TSS region transcription start site region 42199
Tssr42200 4 77916024 to 77916048 24 - TSS region transcription start site region 42200
Tssr42201 4 78003583 to 78003586 3 - TSS region transcription start site region 42201
Fkbp1a-ps4 4 78011434 to 78012670 1236 - pseudogene FK506 binding protein 1a, pseudogene 4
Tssr42202 4 78043811 to 78043820 9 - TSS region transcription start site region 42202
Tssr42203 4 78048896 to 78048907 11 - TSS region transcription start site region 42203
Tssr42204 4 78060413 to 78060418 5 - TSS region transcription start site region 42204
Tssr42205 4 78069484 to 78069496 12 - TSS region transcription start site region 42205
Tssr42206 4 78078434 to 78078454 20 - TSS region transcription start site region 42206
Tssr1209 4 78092208 to 78092212 4 - TSS region transcription start site region 1209
6430598H11Rik 4 78159885 to 78161534 1649 unclassified gene RIKEN cDNA 6430598H11 gene
Tssr42207 4 78180889 to 78180892 3 - TSS region transcription start site region 42207
Cpgi14392 4 78211277 to 78212593 1316 CpG island CpG island 14392
Tssr42208 4 78211685 to 78211696 11 - TSS region transcription start site region 42208
Tssr42209 4 78211732 to 78211754 22 - TSS region transcription start site region 42209
Tssr42210 4 78211758 to 78211790 32 - TSS region transcription start site region 42210
Tssr42211 4 78211827 to 78211889 62 - TSS region transcription start site region 42211
Tssr42212 4 78211949 to 78211999 50 - TSS region transcription start site region 42212
B230208B08Rik 4 78211955 to 78214177 2222 + unclassified non-coding RNA gene RIKEN cDNA B230208B08 gene
Tssr37650 4 78212014 to 78212049 35 + TSS region transcription start site region 37650
Gm11260 4 78234001 to 78234766 765 + pseudogene predicted gene 11260
Gm32545 4 78267867 to 78382708 114841 + lncRNA gene predicted gene, 32545
A430085M09Rik 4 78594047 to 78597484 3437 + lncRNA gene RIKEN cDNA A430085M09 gene
Gm11261 4 78659858 to 78661588 1730 - lincRNA gene predicted gene 11261
Gm22262 4 78670147 to 78670232 85 + unclassified non-coding RNA gene predicted gene, 22262
Gm11262 4 78697652 to 78698928 1276 + pseudogene predicted gene 11262
Tssr37651 4 78773690 to 78773724 34 + TSS region transcription start site region 37651
Tssr37652 4 78773814 to 78773846 32 + TSS region transcription start site region 37652
Tssr37653 4 78774041 to 78774054 13 + TSS region transcription start site region 37653
Gm25836 4 79244587 to 79244709 122 - snoRNA gene predicted gene, 25836
Tssr37654 4 79327663 to 79327665 2 + TSS region transcription start site region 37654
Gm11263 4 79327708 to 79328453 745 + pseudogene predicted gene 11263