Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:74193348-76363360

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61 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Frmd3 4 74013603 to 74202214 188611 + protein coding gene FERM domain containing 3
D4Mit142 4 74219337 to 74219454 117 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 142
Gm11405 4 74228197 to 74229749 1552 + pseudogene predicted gene 11405
Tssr37634 4 74242468 to 74242481 13 + TSS region transcription start site region 37634
Kdm4c 4 74242497 to 74405860 163363 + protein coding gene lysine (K)-specific demethylase 4C
A230083N12Rik 4 74250324 to 74251714 1390 - antisense lncRNA gene RIKEN cDNA A230083N12 gene
Cpgi14389 4 74251367 to 74252772 1405 CpG island CpG island 14389
Tssr42147 4 74251741 to 74251758 17 - TSS region transcription start site region 42147
Tssr42148 4 74251774 to 74251788 14 - TSS region transcription start site region 42148
Tssr37635 4 74251840 to 74251861 21 + TSS region transcription start site region 37635
Tssr37636 4 74251878 to 74251891 13 + TSS region transcription start site region 37636
Tssr37637 4 74251928 to 74251990 62 + TSS region transcription start site region 37637
Tssr37638 4 74251992 to 74252009 17 + TSS region transcription start site region 37638
Tssr37639 4 74252024 to 74252056 32 + TSS region transcription start site region 37639
Tssr37640 4 74258801 to 74258810 9 + TSS region transcription start site region 37640
Tssr37641 4 74259645 to 74259662 17 + TSS region transcription start site region 37641
Tssr37642 4 74265190 to 74265193 3 + TSS region transcription start site region 37642
Tssr37643 4 74360084 to 74360086 2 + TSS region transcription start site region 37643
2700003L17Rik 4 74364701 to 74365013 312 unclassified gene RIKEN cDNA 2700003L17 gene
Tssr37644 4 74384106 to 74384114 8 + TSS region transcription start site region 37644
D4Mit141 4 74512422 to 74512568 146 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 141
Tssr42149 4 74586374 to 74586376 2 - TSS region transcription start site region 42149
Gm26379 4 74635219 to 74635350 131 + snoRNA gene predicted gene, 26379
Gm11254 4 74663683 to 74664335 652 + pseudogene predicted gene 11254
Gm11258 4 74688107 to 74689324 1217 - pseudogene predicted gene 11258
D4Mit296 4 74781990 to 74782088 98 DNA segment DNA Segment, Chr 4, Massachusetts Institute of Technology 296
D4Mit86 4 74786158 to 74786303 145 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 86
Tssr1206 4 74826207 to 74826209 2 + TSS region transcription start site region 1206
Gm18744 4 74903963 to 74904918 955 - pseudogene predicted gene, 18744
Gm46862 4 75068013 to 75071966 3953 + pseudogene predicted gene, 46862
Gm11253 4 75081500 to 75081700 200 - pseudogene predicted gene 11253
Gm11257 4 75128712 to 75129026 314 + pseudogene predicted gene 11257
Gm12912 4 75147609 to 75148989 1380 + pseudogene predicted gene 12912
Dmac1 4 75277354 to 75278286 932 - protein coding gene distal membrane arm assembly complex 1
Cpgi14390 4 75277949 to 75278398 449 CpG island CpG island 14390
Tssr42150 4 75278246 to 75278338 92 - TSS region transcription start site region 42150
Tssr37645 4 75278348 to 75278360 12 + TSS region transcription start site region 37645
Gm22864 4 75280626 to 75280755 129 - snoRNA gene predicted gene, 22864
Gm11255 4 75324501 to 75325677 1176 + pseudogene predicted gene 11255
Gm18654 4 75330902 to 75332351 1449 + pseudogene predicted gene, 18654
Gm11259 4 75380760 to 75381474 714 + pseudogene predicted gene 11259
Tssr37646 4 75549717 to 75549722 5 + TSS region transcription start site region 37646
Gm42300 4 75559631 to 75588755 29124 - lncRNA gene predicted gene, 42300
Gm42299 4 75567293 to 75583723 16430 - lncRNA gene predicted gene, 42299
Gm11256 4 75854603 to 75855394 791 + pseudogene predicted gene 11256
Gm11241 4 75902263 to 75903155 892 - pseudogene predicted gene 11241
Alcw2 4 75941237 to 81442815 5501578 QTL alcohol withdrawal 2
Ptprd 4 75941237 to 78211895 2270658 - protein coding gene protein tyrosine phosphatase, receptor type, D
Tssr42151 4 75982765 to 75982788 23 - TSS region transcription start site region 42151
Tssr42152 4 76102844 to 76102849 5 - TSS region transcription start site region 42152
Tssr42153 4 76104356 to 76104368 12 - TSS region transcription start site region 42153
Obq26 4 76129014 to 76129014 0 QTL obesity QTL 26
Tssr42154 4 76142075 to 76142086 11 - TSS region transcription start site region 42154
A230006I23Rik 4 76192512 to 76196633 4121 unclassified gene RIKEN cDNA A230006I23 gene
Tssr42155 4 76222559 to 76222566 7 - TSS region transcription start site region 42155
Tssr42156 4 76332465 to 76332467 2 - TSS region transcription start site region 42156
Gm46893 4 76338163 to 76345386 7223 + lncRNA gene predicted gene, 46893
Tssr42157 4 76344162 to 76344221 59 - TSS region transcription start site region 42157
Tssr42158 4 76344227 to 76344250 23 - TSS region transcription start site region 42158
Tssr42159 4 76358231 to 76358234 3 - TSS region transcription start site region 42159
Anxty 4 128115487 to 74219337 -53896150 QTL anxiety