MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:57939117-58079133

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Txn1	4	57943373 to 57956411	13038	-	protein coding gene	thioredoxin 1
Tssr41862	4	57943805 to 57943829	24	-	TSS region	transcription start site region 41862
Tssr41863	4	57951842 to 57951860	18	-	TSS region	transcription start site region 41863
Tssr41864	4	57951861 to 57951894	33	-	TSS region	transcription start site region 41864
Tssr41865	4	57953520 to 57953533	13	-	TSS region	transcription start site region 41865
Cpgi14335	4	57955516 to 57956951	1435		CpG island	CpG island 14335
Tssr41866	4	57956283 to 57956298	15	-	TSS region	transcription start site region 41866
Tssr1183	4	57956311 to 57956358	47	-	TSS region	transcription start site region 1183
Tssr1184	4	57956416 to 57956424	8	-	TSS region	transcription start site region 1184
Gm35344	4	57956508 to 57968149	11641	+	lncRNA gene	predicted gene, 35344
Tssr37396	4	57956622 to 57956626	4	+	TSS region	transcription start site region 37396
Tssr37397	4	57956924 to 57956967	43	+	TSS region	transcription start site region 37397
Txndc8	4	57984027 to 58009124	25097	-	protein coding gene	thioredoxin domain containing 8
Tssr41867	4	58009074 to 58009083	9	-	TSS region	transcription start site region 41867
Tssr41868	4	58009090 to 58009101	11	-	TSS region	transcription start site region 41868
Tssr41869	4	58009117 to 58009133	16	-	TSS region	transcription start site region 41869
Gm35402	4	58034506 to 58065819	31313	+	lncRNA gene	predicted gene, 35402
Svep1	4	58042796 to 58206596	163800	-	protein coding gene	sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1