Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:45034269-45335616

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Polr1e 4 45018609 to 45034279 15670 + protein coding gene polymerase (RNA) I polypeptide E
Fbxo10 4 45034247 to 45084604 50357 - protein coding gene F-box protein 10
Gm30939 4 45044936 to 45061986 17050 + lncRNA gene predicted gene, 30939
Im2 4 45077682 to 45077816 134 QTL immunoregulatory 2
D4Mit5 4 45077682 to 45077816 134 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 5
Cpgi14228 4 45084059 to 45085000 941 CpG island CpG island 14228
Tssr41529 4 45084538 to 45084603 65 - TSS region transcription start site region 41529
Tomm5 4 45105209 to 45108113 2904 - protein coding gene translocase of outer mitochondrial membrane 5
Cpgi14229 4 45107562 to 45108170 608 CpG island CpG island 14229
Tssr41530 4 45108069 to 45108128 59 - TSS region transcription start site region 41530
Tssr37052 4 45121573 to 45121590 17 + TSS region transcription start site region 37052
D4Mit1006 4 45127937 to 45128086 149 DNA segment DNA Segment, Chr 4, Massachusetts Institute of Technology 1006
Tssr37053 4 45130447 to 45130450 3 + TSS region transcription start site region 37053
Gm12566 4 45136250 to 45136608 358 - pseudogene predicted gene 12566
Cpgi14230 4 45142646 to 45142826 180 CpG island CpG island 14230
Cpgi14231 4 45184269 to 45185616 1347 CpG island CpG island 14231
Tssr37054 4 45184722 to 45184760 38 + TSS region transcription start site region 37054
Tssr37055 4 45184815 to 45184851 36 + TSS region transcription start site region 37055
Frmpd1 4 45184875 to 45285936 101061 + protein coding gene FERM and PDZ domain containing 1
Tssr37056 4 45203884 to 45203889 5 + TSS region transcription start site region 37056
Tssr37057 4 45203915 to 45203920 5 + TSS region transcription start site region 37057
Tssr37058 4 45203921 to 45203931 10 + TSS region transcription start site region 37058
D4Mit238 4 45230131 to 45230241 110 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 238
Frmpd1os 4 45234723 to 45243990 9267 - antisense lncRNA gene FERM and PDZ domain containing 1, opposite strand
Trmt10b 4 45297127 to 45316131 19004 + protein coding gene tRNA methyltransferase 10B
Tssr37059 4 45297150 to 45297175 25 + TSS region transcription start site region 37059
Cpgi14232 4 45297246 to 45297499 253 CpG island CpG island 14232
Exosc3 4 45316629 to 45320603 3974 - protein coding gene exosome component 3
Cpgi14233 4 45320032 to 45320865 833 CpG island CpG island 14233
Tssr41531 4 45320270 to 45320283 13 - TSS region transcription start site region 41531
Tssr37060 4 45320373 to 45320383 10 + TSS region transcription start site region 37060
Tssr41532 4 45320376 to 45320438 62 - TSS region transcription start site region 41532
Tssr37061 4 45320385 to 45320397 12 + TSS region transcription start site region 37061
Tssr37062 4 45320418 to 45320429 11 + TSS region transcription start site region 37062
Tssr41533 4 45320462 to 45320473 11 - TSS region transcription start site region 41533
Tssr41534 4 45320580 to 45320634 54 - TSS region transcription start site region 41534
Tssr37063 4 45331930 to 45331932 2 + TSS region transcription start site region 37063
Gm31017 4 45332386 to 45336787 4401 - lncRNA gene predicted gene, 31017
D4Mit138 4 45334483 to 45334611 128 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 138