Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:41514650-41624659

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
1110017D15Rik 4 41505009 to 41517333 12324 - protein coding gene RIKEN cDNA 1110017D15 gene
Tssr41346 4 41517280 to 41517292 12 - TSS region transcription start site region 41346
Tssr41347 4 41517301 to 41517323 22 - TSS region transcription start site region 41347
Tssr41348 4 41517326 to 41517337 11 - TSS region transcription start site region 41348
Tssr36872 4 41517407 to 41517416 9 + TSS region transcription start site region 36872
Tssr36873 4 41517423 to 41517436 13 + TSS region transcription start site region 36873
Fam219aos 4 41517437 to 41518929 1492 + antisense lncRNA gene family with sequence similarity 219, member A, opposite strand
Tssr36874 4 41517438 to 41517447 9 + TSS region transcription start site region 36874
Fam219a 4 41517691 to 41569533 51842 - protein coding gene family with sequence similarity 219, member A
Tssr41349 4 41520305 to 41520325 20 - TSS region transcription start site region 41349
Gm12404 4 41520405 to 41521448 1043 + lncRNA gene predicted gene 12404
Cpgi14160 4 41568298 to 41569938 1640 CpG island CpG island 14160
Tssr41350 4 41569404 to 41569415 11 - TSS region transcription start site region 41350
Tssr41351 4 41569434 to 41569465 31 - TSS region transcription start site region 41351
Tssr41352 4 41569474 to 41569481 7 - TSS region transcription start site region 41352
Tssr41353 4 41569484 to 41569491 7 - TSS region transcription start site region 41353
Tssr41354 4 41569502 to 41569551 49 - TSS region transcription start site region 41354
Tssr41355 4 41569650 to 41569659 9 - TSS region transcription start site region 41355
Tssr41356 4 41569661 to 41569670 9 - TSS region transcription start site region 41356
Dnaic1 4 41569775 to 41638158 68383 + protein coding gene dynein, axonemal, intermediate chain 1
Tssr36875 4 41569791 to 41569822 31 + TSS region transcription start site region 36875
Tssr36876 4 41569828 to 41569876 48 + TSS region transcription start site region 36876