MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:39731874-40157708

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20 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm34007	4	39714710 to 39791320	76610	-	lncRNA gene	predicted gene, 34007
Tssr1138	4	39740758 to 39740759	1	+	TSS region	transcription start site region 1138
Gm12385	4	39767618 to 39768412	794	+	pseudogene	predicted gene 12385
Gm34071	4	39788744 to 39792398	3654	+	lncRNA gene	predicted gene, 34071
Gm12384	4	39823722 to 39824365	643	+	pseudogene	predicted gene 12384
Gm12386	4	39844187 to 39844874	687	-	pseudogene	predicted gene 12386
Gm22850	4	39865687 to 39865768	81	+	snRNA gene	predicted gene, 22850
Gm12387	4	39895208 to 39896162	954	-	pseudogene	predicted gene 12387
Gm34132	4	39936874 to 39952708	15834	-	lncRNA gene	predicted gene, 34132
Gm26087	4	39981497 to 39981558	61	-	snRNA gene	predicted gene, 26087
Tssr41234	4	40063792 to 40063811	19	-	TSS region	transcription start site region 41234
Gm12388	4	40069139 to 40070981	1842	+	pseudogene	predicted gene 12388
Gm12389	4	40116816 to 40117233	417	-	pseudogene	predicted gene 12389
Cpgi14134	4	40142842 to 40144030	1188		CpG island	CpG island 14134
Tssr36790	4	40143080 to 40143107	27	+	TSS region	transcription start site region 36790
Aco1	4	40143081 to 40198338	55257	+	protein coding gene	aconitase 1
Tssr36791	4	40143368 to 40143444	76	+	TSS region	transcription start site region 36791
Tssr36792	4	40143460 to 40143502	42	+	TSS region	transcription start site region 36792
Tssr36793	4	40143510 to 40143521	11	+	TSS region	transcription start site region 36793
Tssr36794	4	40155821 to 40155831	10	+	TSS region	transcription start site region 36794