MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:141870654-141912282

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Efhd2	4	141858142 to 141874920	16778	-	protein coding gene	EF hand domain containing 2
Tssr44403	4	141871082 to 141871118	36	-	TSS region	transcription start site region 44403
Tssr40119	4	141873209 to 141873237	28	+	TSS region	transcription start site region 40119
Cpgi15248	4	141874264 to 141875444	1180		CpG island	CpG island 15248
Tssr44404	4	141874879 to 141874953	74	-	TSS region	transcription start site region 44404
Tssr44405	4	141875251 to 141875300	49	-	TSS region	transcription start site region 44405
Tssr44406	4	141875311 to 141875322	11	-	TSS region	transcription start site region 44406
Gm29367	4	141875707 to 141877033	1326	+	lincRNA gene	predicted gene 29367
Gm46874	4	141879684 to 141885620	5936	-	lncRNA gene	predicted gene, 46874
Fhad1os2	4	141885654 to 141897282	11628	+	antisense lncRNA gene	forkhead-associated (FHA) phosphopeptide binding domain 1, opposite strand 2
Fhad1	4	141890438 to 142015082	124644	-	protein coding gene	forkhead-associated (FHA) phosphopeptide binding domain 1
Adip12	4	141893970 to 141894076	106		QTL	adiposity 12
D4Mit312	4	141893970 to 141894076	106		DNA segment	DNA Segment, Chr 4, Massachusetts Institute of Technology 312
Pltiq1	4	141893970 to 141894076	106		QTL	phospholipid transfer protein inducibility QTL 1
Tafat	4	141893970 to 141894076	106		QTL	TallyHo associated mesenteric fat pad weight
Tssr40120	4	141901990 to 141901993	3	+	TSS region	transcription start site region 40120
Gm42338	4	141909876 to 141915922	6046	+	lncRNA gene	predicted gene, 42338