Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:141609044-141819049

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77 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pwbwq9 4 105978113 to 141706527 35728414 QTL post-weaning body weight QTL 9
Pwbwq4 4 105978113 to 141706527 35728414 QTL pre-weaning body weight QTL 4
Pwbwq8 4 105978113 to 141706527 35728414 QTL post-weaning body weight QTL 8
Pwgrq4 4 105978113 to 141706527 35728414 QTL pre-weaning growth rate QTL 4
Tmem82 4 141614229 to 141618633 4404 - protein coding gene transmembrane protein 82
Tssr40087 4 141614313 to 141614315 2 + TSS region transcription start site region 40087
Tssr40088 4 141614340 to 141614389 49 + TSS region transcription start site region 40088
AI507597 4 141614370 to 141615604 1234 + antisense lncRNA gene expressed sequence AI507597
Tssr40089 4 141614584 to 141614593 9 + TSS region transcription start site region 40089
Cpgi15238 4 141617310 to 141618032 722 CpG island CpG island 15238
Tssr44347 4 141617996 to 141618056 60 - TSS region transcription start site region 44347
Slc25a34 4 141618824 to 141623821 4997 - protein coding gene solute carrier family 25, member 34
Tssr1363 4 141623138 to 141623143 5 - TSS region transcription start site region 1363
Tssr40090 4 141623276 to 141623285 9 + TSS region transcription start site region 40090
Tssr44348 4 141623799 to 141623840 41 - TSS region transcription start site region 44348
Plekhm2 4 141625732 to 141664115 38383 - protein coding gene pleckstrin homology domain containing, family M (with RUN domain) member 2
Cpgi15239 4 141628239 to 141628585 346 CpG island CpG island 15239
Tssr44349 4 141642130 to 141642147 17 - TSS region transcription start site region 44349
Tssr44350 4 141642168 to 141642201 33 - TSS region transcription start site region 44350
Tssr44351 4 141642823 to 141642834 11 - TSS region transcription start site region 44351
Tssr44352 4 141644964 to 141644969 5 - TSS region transcription start site region 44352
4930451G21Rik 4 141652123 to 141654919 2796 unclassified gene RIKEN cDNA 4930451G21 gene
Tssr44353 4 141652372 to 141652413 41 - TSS region transcription start site region 44353
Tssr44354 4 141652455 to 141652479 24 - TSS region transcription start site region 44354
Cpgi15240 4 141663184 to 141664580 1396 CpG island CpG island 15240
Tssr44355 4 141663999 to 141664021 22 - TSS region transcription start site region 44355
Tssr44356 4 141664063 to 141664170 107 - TSS region transcription start site region 44356
Tssr40091 4 141664187 to 141664231 44 + TSS region transcription start site region 40091
Tssr40092 4 141664241 to 141664249 8 + TSS region transcription start site region 40092
Tssr44357 4 141679549 to 141679551 2 - TSS region transcription start site region 44357
Ddi2 4 141683563 to 141723419 39856 - protein coding gene DNA-damage inducible protein 2
Rsc1a1 4 141683851 to 141685599 1748 - protein coding gene regulatory solute carrier protein, family 1, member 1
Tssr44358 4 141696043 to 141696047 4 - TSS region transcription start site region 44358
Tssr44359 4 141708402 to 141708414 12 - TSS region transcription start site region 44359
Tssr40093 4 141714044 to 141714049 5 + TSS region transcription start site region 40093
Cpgi15241 4 141722732 to 141723927 1195 CpG island CpG island 15241
Tssr44360 4 141723297 to 141723308 11 - TSS region transcription start site region 44360
Tssr44361 4 141723401 to 141723436 35 - TSS region transcription start site region 44361
Tssr1364 4 141723439 to 141723454 15 - TSS region transcription start site region 1364
Tssr44362 4 141723458 to 141723466 8 - TSS region transcription start site region 44362
Gm34863 4 141729503 to 141743817 14314 + lncRNA gene predicted gene, 34863
Cpgi15242 4 141734916 to 141735267 351 CpG island CpG island 15242
Agmat 4 141746675 to 141759263 12588 + protein coding gene agmatine ureohydrolase (agmatinase)
Tssr40094 4 141746730 to 141746759 29 + TSS region transcription start site region 40094
Tssr40095 4 141746769 to 141746787 18 + TSS region transcription start site region 40095
Tssr40096 4 141746792 to 141746814 22 + TSS region transcription start site region 40096
Cpgi15243 4 141746870 to 141747160 290 CpG island CpG island 15243
Tssr40097 4 141750293 to 141750294 1 + TSS region transcription start site region 40097
Tssr40098 4 141757347 to 141757395 48 + TSS region transcription start site region 40098
Dnajc16 4 141761998 to 141790644 28646 - protein coding gene DnaJ heat shock protein family (Hsp40) member C16
Cpgi15244 4 141790063 to 141791116 1053 CpG island CpG island 15244
Tssr44363 4 141790629 to 141790698 69 - TSS region transcription start site region 44363
Tssr44364 4 141790899 to 141790941 42 - TSS region transcription start site region 44364
Cpgi15245 4 141793076 to 141794180 1104 CpG island CpG island 15245
Tssr44365 4 141793183 to 141793188 5 - TSS region transcription start site region 44365
Casp9 4 141793612 to 141815976 22364 + protein coding gene caspase 9
Tssr40099 4 141793705 to 141793735 30 + TSS region transcription start site region 40099
Tssr40100 4 141793789 to 141793809 20 + TSS region transcription start site region 40100
Tssr40101 4 141793818 to 141793848 30 + TSS region transcription start site region 40101
Tssr40102 4 141814957 to 141814971 14 + TSS region transcription start site region 40102
Cela2a 4 141814963 to 141826003 11040 - protein coding gene chymotrypsin-like elastase family, member 2A
Tssr40103 4 141814982 to 141814987 5 + TSS region transcription start site region 40103
Tssr44366 4 141814993 to 141815063 70 - TSS region transcription start site region 44366
Tssr40104 4 141814995 to 141815033 38 + TSS region transcription start site region 40104
Tssr44367 4 141815789 to 141815791 2 - TSS region transcription start site region 44367
Tssr44368 4 141816734 to 141816738 4 - TSS region transcription start site region 44368
Tssr40105 4 141817860 to 141817899 39 + TSS region transcription start site region 40105
Tssr44369 4 141817885 to 141817897 12 - TSS region transcription start site region 44369
Tssr44370 4 141817899 to 141817937 38 - TSS region transcription start site region 44370
Tssr40106 4 141817903 to 141817930 27 + TSS region transcription start site region 40106
Tssr44371 4 141817947 to 141817968 21 - TSS region transcription start site region 44371
Tssr40107 4 141817974 to 141817982 8 + TSS region transcription start site region 40107
Tssr44372 4 141817975 to 141817999 24 - TSS region transcription start site region 44372
Tssr44373 4 141818280 to 141818286 6 - TSS region transcription start site region 44373
Cpgi15246 4 141818902 to 141819077 175 CpG island CpG island 15246
Tssr44374 4 141819019 to 141819132 113 - TSS region transcription start site region 44374
Tssr40108 4 141819024 to 141819044 20 + TSS region transcription start site region 40108