Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:141496141-141596202

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Spen 4 141467890 to 141538597 70707 - protein coding gene spen family transcription repressor
Gm4123 4 141535513 to 141537422 1909 + unclassified gene predicted gene 4123
Cpgi15233 4 141536165 to 141537207 1042 CpG island CpG island 15233
Cpgi15234 4 141537419 to 141539085 1666 CpG island CpG island 15234
Tssr44321 4 141538434 to 141538525 91 - TSS region transcription start site region 44321
Tssr44322 4 141538562 to 141538626 64 - TSS region transcription start site region 44322
B830004H01Rik 4 141539208 to 141543604 4396 unclassified non-coding RNA gene RIKEN cDNA B830004H01 gene
Cpgi15235 4 141545097 to 141547224 2127 CpG island CpG island 15235
Tssr40080 4 141545213 to 141545230 17 + TSS region transcription start site region 40080
Tssr44323 4 141545864 to 141545897 33 - TSS region transcription start site region 44323
Tssr40081 4 141546141 to 141546202 61 + TSS region transcription start site region 40081
B330016D10Rik 4 141546189 to 141547892 1703 + unclassified non-coding RNA gene RIKEN cDNA B330016D10 gene
Tssr1362 4 141546765 to 141546799 34 + TSS region transcription start site region 1362
Tssr40082 4 141546800 to 141546829 29 + TSS region transcription start site region 40082
Tssr44324 4 141547039 to 141547057 18 - TSS region transcription start site region 44324
Tssr44325 4 141559419 to 141559427 8 - TSS region transcription start site region 44325
Cpgi15236 4 141559532 to 141560025 493 CpG island CpG island 15236
Tssr44326 4 141566337 to 141566344 7 - TSS region transcription start site region 44326
Tssr44327 4 141566353 to 141566381 28 - TSS region transcription start site region 44327
Tssr44328 4 141566384 to 141566393 9 - TSS region transcription start site region 44328
Tssr40083 4 141566483 to 141566500 17 + TSS region transcription start site region 40083
Tssr44329 4 141571482 to 141571489 7 - TSS region transcription start site region 44329
Tssr44330 4 141571517 to 141571544 27 - TSS region transcription start site region 44330
Tssr44331 4 141571611 to 141571634 23 - TSS region transcription start site region 44331
Tssr40084 4 141572261 to 141572272 11 + TSS region transcription start site region 40084
Tssr40085 4 141573265 to 141573288 23 + TSS region transcription start site region 40085
Tssr40086 4 141573481 to 141573526 45 + TSS region transcription start site region 40086
Fblim1 4 141576062 to 141606052 29990 - protein coding gene filamin binding LIM protein 1
Tssr44332 4 141576805 to 141576834 29 - TSS region transcription start site region 44332
Tssr44333 4 141581389 to 141581395 6 - TSS region transcription start site region 44333
Tssr44334 4 141586803 to 141586806 3 - TSS region transcription start site region 44334
Tssr44335 4 141595935 to 141595961 26 - TSS region transcription start site region 44335
D4Mit284 4 141596121 to 141596243 122 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 284