Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:140700546-140800563

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr39977 4 140700602 to 140700613 11 + TSS region transcription start site region 39977
Cpgi15195 4 140701065 to 140703374 2309 CpG island CpG island 15195
Tssr44273 4 140701069 to 140701089 20 - TSS region transcription start site region 44273
Tssr39978 4 140701426 to 140701437 11 + TSS region transcription start site region 39978
Tssr39979 4 140701447 to 140701463 16 + TSS region transcription start site region 39979
Tssr39980 4 140701466 to 140701509 43 + TSS region transcription start site region 39980
Rcc2 4 140701473 to 140723220 21747 + protein coding gene regulator of chromosome condensation 2
Tssr39981 4 140701510 to 140701521 11 + TSS region transcription start site region 39981
Tssr39982 4 140701522 to 140701548 26 + TSS region transcription start site region 39982
Tssr39983 4 140701608 to 140701619 11 + TSS region transcription start site region 39983
Tssr39984 4 140701833 to 140701839 6 + TSS region transcription start site region 39984
Tssr39985 4 140701895 to 140701922 27 + TSS region transcription start site region 39985
Tssr39986 4 140701936 to 140701962 26 + TSS region transcription start site region 39986
Tssr39987 4 140702081 to 140702150 69 + TSS region transcription start site region 39987
Tssr39988 4 140702177 to 140702198 21 + TSS region transcription start site region 39988
Tssr39989 4 140702216 to 140702238 22 + TSS region transcription start site region 39989
Tssr44274 4 140702398 to 140702448 50 - TSS region transcription start site region 44274
Tssr44275 4 140703666 to 140703675 9 - TSS region transcription start site region 44275
Tssr39990 4 140712780 to 140712782 2 + TSS region transcription start site region 39990
Tssr39991 4 140714294 to 140714305 11 + TSS region transcription start site region 39991
Tssr39992 4 140714318 to 140714357 39 + TSS region transcription start site region 39992
Gm25951 4 140717043 to 140717106 63 + miRNA gene predicted gene, 25951
Tssr39993 4 140720540 to 140720567 27 + TSS region transcription start site region 39993
Tssr39994 4 140721168 to 140721193 25 + TSS region transcription start site region 39994
Padi6 4 140727355 to 140742643 15288 - protein coding gene peptidyl arginine deiminase, type VI
D4Mit64 4 140740705 to 140740892 187 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 64
W3q17 4 140740892 to 89063832 -51677060 QTL weight 3 weeks QTL 17
W6q13 4 140740892 to 89063832 -51677060 QTL weight 6 weeks QTL 13
W10q10 4 140740892 to 89063832 -51677060 QTL weight 10 weeks QTL 10
Lvrq8 4 140740892 to 89063832 -51677060 QTL liver weight QTL 8
Tssr44276 4 140742639 to 140742644 5 - TSS region transcription start site region 44276
Padi4 4 140745865 to 140774236 28371 - protein coding gene peptidyl arginine deiminase, type IV
Cpgi15196 4 140750370 to 140750733 363 CpG island CpG island 15196
Tssr1360 4 140750514 to 140750521 7 - TSS region transcription start site region 1360
Tssr44277 4 140750546 to 140750563 17 - TSS region transcription start site region 44277
Tssr44278 4 140750569 to 140750587 18 - TSS region transcription start site region 44278
Tssr44279 4 140750602 to 140750618 16 - TSS region transcription start site region 44279
Tssr44280 4 140774196 to 140774212 16 - TSS region transcription start site region 44280
Padi3 4 140785369 to 140810648 25279 - protein coding gene peptidyl arginine deiminase, type III