MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:139594027-139744631

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Iffo2	4	139530548 to 139620382	89834	+	protein coding gene	intermediate filament family orphan 2
Tssr44231	4	139599121 to 139599145	24	-	TSS region	transcription start site region 44231
Gm21969	4	139603186 to 139662691	59505	+	protein coding gene	predicted gene 21969
Cpgi15172	4	139614832 to 139615079	247		CpG island	CpG island 15172
Cpgi15173	4	139616334 to 139616667	333		CpG island	CpG island 15173
Tssr44232	4	139622625 to 139622675	50	-	TSS region	transcription start site region 44232
Tssr39958	4	139622842 to 139622902	60	+	TSS region	transcription start site region 39958
Aldh4a1	4	139622871 to 139649691	26820	+	protein coding gene	aldehyde dehydrogenase 4 family, member A1
Panc1	4	139622871 to 150009023	10386152		heritable phenotypic marker	pancreas protein 1
Pphc2	4	139622871 to 150009023	10386152		heritable phenotypic marker	polyunsaturated fat induced postprandial hypercholesterolemia
Cpgi15174	4	139622967 to 139623633	666		CpG island	CpG island 15174
Tssr39959	4	139623089 to 139623134	45	+	TSS region	transcription start site region 39959
Tssr39960	4	139629399 to 139629407	8	+	TSS region	transcription start site region 39960
Mir7020	4	139644042 to 139644111	69	+	miRNA gene	microRNA 7020
Tas1r2	4	139653538 to 139670280	16742	+	protein coding gene	taste receptor, type 1, member 2
Cpgi15175	4	139669027 to 139669631	604		CpG island	CpG island 15175
Gm42334	4	139734957 to 139735657	700	+	lncRNA gene	predicted gene, 42334
Pax7	4	139737059 to 139833026	95967	-	protein coding gene	paired box 7