Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:137481834-137771838

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69 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hspg2 4 137468769 to 137570630 101861 + protein coding gene perlecan (heparan sulfate proteoglycan 2)
Tssr1347 4 137484694 to 137484697 3 + TSS region transcription start site region 1347
Tssr39752 4 137485163 to 137485174 11 + TSS region transcription start site region 39752
Tssr39753 4 137507246 to 137507250 4 + TSS region transcription start site region 39753
Tssr1348 4 137510971 to 137510992 21 + TSS region transcription start site region 1348
Tssr39754 4 137511066 to 137511103 37 + TSS region transcription start site region 39754
Mir7018 4 137538286 to 137538370 84 + miRNA gene microRNA 7018
Cpgi15130 4 137553621 to 137553826 205 CpG island CpG island 15130
Tssr39755 4 137554430 to 137554432 2 + TSS region transcription start site region 39755
Tssr39756 4 137560670 to 137560679 9 + TSS region transcription start site region 39756
Tssr39757 4 137560698 to 137560719 21 + TSS region transcription start site region 39757
Tssr39758 4 137560724 to 137560738 14 + TSS region transcription start site region 39758
Tssr39759 4 137563943 to 137563963 20 + TSS region transcription start site region 39759
Ldlrad2 4 137572083 to 137574569 2486 - protein coding gene low density lipoprotein receptor class A domain containing 2
Cpgi15131 4 137578194 to 137578729 535 CpG island CpG island 15131
Cpgi15132 4 137593499 to 137595149 1650 CpG island CpG island 15132
Tssr44127 4 137593575 to 137593584 9 - TSS region transcription start site region 44127
Tssr39760 4 137594149 to 137594274 125 + TSS region transcription start site region 39760
Usp48 4 137594149 to 137658537 64388 + protein coding gene ubiquitin specific peptidase 48
Tssr39761 4 137594312 to 137594319 7 + TSS region transcription start site region 39761
Tssr44128 4 137594817 to 137594842 25 - TSS region transcription start site region 44128
Tssr39762 4 137594941 to 137594968 27 + TSS region transcription start site region 39762
Tssr44129 4 137598562 to 137598569 7 - TSS region transcription start site region 44129
Tssr39763 4 137610671 to 137610708 37 + TSS region transcription start site region 39763
Tssr39764 4 137611950 to 137611951 1 + TSS region transcription start site region 39764
Tssr39765 4 137614539 to 137614543 4 + TSS region transcription start site region 39765
Tssr39766 4 137621039 to 137621050 11 + TSS region transcription start site region 39766
Tssr39767 4 137626692 to 137626707 15 + TSS region transcription start site region 39767
Tssr39768 4 137626834 to 137626838 4 + TSS region transcription start site region 39768
Tssr39769 4 137640324 to 137640327 3 + TSS region transcription start site region 39769
Cpgi15133 4 137664120 to 137665432 1312 CpG island CpG island 15133
Tssr39770 4 137664707 to 137664787 80 + TSS region transcription start site region 39770
Rap1gap 4 137664726 to 137729861 65135 + protein coding gene Rap1 GTPase-activating protein
Tssr44130 4 137666355 to 137666359 4 - TSS region transcription start site region 44130
Cpgi15134 4 137680981 to 137682372 1391 CpG island CpG island 15134
Tssr39771 4 137681589 to 137681618 29 + TSS region transcription start site region 39771
Tssr39772 4 137681663 to 137681719 56 + TSS region transcription start site region 39772
Tssr1349 4 137681724 to 137681735 11 + TSS region transcription start site region 1349
Tssr39773 4 137687390 to 137687428 38 + TSS region transcription start site region 39773
Cpgi15135 4 137689584 to 137689756 172 CpG island CpG island 15135
Rap1gapos 4 137696979 to 137706606 9627 - antisense lncRNA gene RAP1 GTPase activating protein, opposite strand
Tssr44131 4 137706603 to 137706627 24 - TSS region transcription start site region 44131
Cpgi15136 4 137707034 to 137708179 1145 CpG island CpG island 15136
Tssr39774 4 137707458 to 137707527 69 + TSS region transcription start site region 39774
Tssr39775 4 137712023 to 137712041 18 + TSS region transcription start site region 39775
Tssr39776 4 137717330 to 137717355 25 + TSS region transcription start site region 39776
Tssr39777 4 137717364 to 137717381 17 + TSS region transcription start site region 39777
Tssr39778 4 137719214 to 137719223 9 + TSS region transcription start site region 39778
Tssr39779 4 137719244 to 137719253 9 + TSS region transcription start site region 39779
Tssr39780 4 137719520 to 137719523 3 + TSS region transcription start site region 39780
Tssr39781 4 137719685 to 137719725 40 + TSS region transcription start site region 39781
Tssr39782 4 137724446 to 137724475 29 + TSS region transcription start site region 39782
Cpgi15137 4 137726803 to 137727126 323 CpG island CpG island 15137
Cpgi15138 4 137729154 to 137729498 344 CpG island CpG island 15138
Alpl 4 137741733 to 137796384 54651 - protein coding gene alkaline phosphatase, liver/bone/kidney
Tssr44132 4 137742425 to 137742434 9 - TSS region transcription start site region 44132
Tssr44133 4 137758675 to 137758698 23 - TSS region transcription start site region 44133
Tssr44134 4 137766433 to 137766444 11 - TSS region transcription start site region 44134
Tssr44135 4 137766460 to 137766466 6 - TSS region transcription start site region 44135
Tssr44136 4 137766474 to 137766501 27 - TSS region transcription start site region 44136
Tssr44137 4 137769663 to 137769675 12 - TSS region transcription start site region 44137
Tssr44138 4 137769694 to 137769714 20 - TSS region transcription start site region 44138
Tssr44139 4 137769948 to 137769955 7 - TSS region transcription start site region 44139
Tssr44140 4 137769962 to 137769967 5 - TSS region transcription start site region 44140
Tssr44141 4 137769979 to 137769983 4 - TSS region transcription start site region 44141
Tssr44142 4 137769988 to 137770003 15 - TSS region transcription start site region 44142
Tssr44143 4 137770004 to 137770025 21 - TSS region transcription start site region 44143
Tssr44144 4 137770030 to 137770040 10 - TSS region transcription start site region 44144
Tssr44145 4 137770055 to 137770066 11 - TSS region transcription start site region 44145