Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:136597539-136885988

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Kdm1a 4 136550540 to 136602723 52183 - protein coding gene lysine (K)-specific demethylase 1A
Cpgi15114 4 136601910 to 136603033 1123 CpG island CpG island 15114
Tssr44038 4 136602577 to 136602602 25 - TSS region transcription start site region 44038
Tssr44039 4 136602609 to 136602616 7 - TSS region transcription start site region 44039
Tssr44040 4 136602619 to 136602634 15 - TSS region transcription start site region 44040
Tssr44041 4 136602641 to 136602760 119 - TSS region transcription start site region 44041
Tssr44042 4 136602776 to 136602798 22 - TSS region transcription start site region 44042
Gm12986 4 136608840 to 136609806 966 - pseudogene predicted gene 12986
Gm22180 4 136609806 to 136609864 58 - miRNA gene predicted gene, 22180
Tssr39715 4 136610431 to 136610451 20 + TSS region transcription start site region 39715
Tex46 4 136610437 to 136613226 2789 + protein coding gene testis expressed 46
Tssr39716 4 136622612 to 136622621 9 + TSS region transcription start site region 39716
Lactbl1 4 136622621 to 136639110 16489 + protein coding gene lactamase, beta-like 1
Tssr39717 4 136622631 to 136622652 21 + TSS region transcription start site region 39717
Cpgi15115 4 136637020 to 136638456 1436 CpG island CpG island 15115
Gm37583 4 136639582 to 136642068 2486 + unclassified gene predicted gene, 37583
Tssr39718 4 136640048 to 136640051 3 + TSS region transcription start site region 39718
Ephb2 4 136647539 to 136835988 188449 - protein coding gene Eph receptor B2
Tssr39719 4 136653232 to 136653243 11 + TSS region transcription start site region 39719
Bllact2 4 136674649 to 136674649 0 QTL base line locomotor activity 2
Tssr44043 4 136676137 to 136676140 3 - TSS region transcription start site region 44043
Tssr44044 4 136687990 to 136687999 9 - TSS region transcription start site region 44044
Tssr44045 4 136688008 to 136688019 11 - TSS region transcription start site region 44045
Tssr44046 4 136688036 to 136688043 7 - TSS region transcription start site region 44046
Tssr44047 4 136695615 to 136695628 13 - TSS region transcription start site region 44047
Tssr44048 4 136738170 to 136738174 4 - TSS region transcription start site region 44048
Cpgi15116 4 136755462 to 136755871 409 CpG island CpG island 15116
Cpgi15117 4 136770872 to 136771659 787 CpG island CpG island 15117
Cpgi15118 4 136782043 to 136782246 203 CpG island CpG island 15118
Tssr44049 4 136785790 to 136785791 1 - TSS region transcription start site region 44049
Tssr39720 4 136802144 to 136802159 15 + TSS region transcription start site region 39720
Tssr44050 4 136819533 to 136819548 15 - TSS region transcription start site region 44050
Tssr44051 4 136819667 to 136819684 17 - TSS region transcription start site region 44051
Cpgi15119 4 136834807 to 136836838 2031 CpG island CpG island 15119
Tssr44052 4 136835967 to 136835982 15 - TSS region transcription start site region 44052
Gm31536 4 136836026 to 136842074 6048 + lncRNA gene predicted gene, 31536
C1qb 4 136880145 to 136886177 6032 - protein coding gene complement component 1, q subcomponent, beta polypeptide
Tssr44053 4 136880273 to 136880285 12 - TSS region transcription start site region 44053
Tssr44054 4 136880332 to 136880343 11 - TSS region transcription start site region 44054
Tssr44055 4 136880344 to 136880353 9 - TSS region transcription start site region 44055
Tssr44056 4 136880379 to 136880397 18 - TSS region transcription start site region 44056
Tssr39721 4 136880404 to 136880417 13 + TSS region transcription start site region 39721
Tssr44057 4 136880408 to 136880422 14 - TSS region transcription start site region 44057
Tssr39722 4 136880495 to 136880554 59 + TSS region transcription start site region 39722
Tssr44058 4 136880517 to 136880529 12 - TSS region transcription start site region 44058
Tssr44059 4 136880553 to 136880569 16 - TSS region transcription start site region 44059
Tssr39723 4 136880561 to 136880613 52 + TSS region transcription start site region 39723
Tssr44060 4 136880575 to 136880594 19 - TSS region transcription start site region 44060
Tssr44061 4 136880698 to 136880728 30 - TSS region transcription start site region 44061
Tssr44062 4 136880734 to 136880743 9 - TSS region transcription start site region 44062
Tssr44063 4 136880762 to 136880773 11 - TSS region transcription start site region 44063
Tssr44064 4 136880780 to 136880800 20 - TSS region transcription start site region 44064
Tssr44065 4 136882201 to 136882238 37 - TSS region transcription start site region 44065
Tssr44066 4 136882281 to 136882296 15 - TSS region transcription start site region 44066