Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:135981629-136061665

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pithd1 4 135975602 to 135987244 11642 - protein coding gene PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1
Cpgi15088 4 135986522 to 135987668 1146 CpG island CpG island 15088
Tssr44017 4 135987013 to 135987018 5 - TSS region transcription start site region 44017
Tssr44018 4 135987156 to 135987179 23 - TSS region transcription start site region 44018
Tssr44019 4 135987182 to 135987269 87 - TSS region transcription start site region 44019
Tssr44020 4 135988075 to 135988117 42 - TSS region transcription start site region 44020
Tssr39665 4 135997427 to 135997431 4 + TSS region transcription start site region 39665
Cpgi15089 4 135997433 to 135997637 204 CpG island CpG island 15089
Gm13007 4 135997523 to 135997887 364 + pseudogene predicted gene 13007
Eloa 4 136003370 to 136021649 18279 - protein coding gene elongin A
Gm13008 4 136003566 to 136010937 7371 + antisense lncRNA gene predicted gene 13008
Tssr44021 4 136005238 to 136005242 4 - TSS region transcription start site region 44021
Tssr44022 4 136010534 to 136010545 11 - TSS region transcription start site region 44022
Gm24362 4 136018071 to 136018486 415 - sense intronic lncRNA gene predicted gene, 24362
Cpgi15090 4 136020946 to 136022114 1168 CpG island CpG island 15090
Tssr44023 4 136021629 to 136021665 36 - TSS region transcription start site region 44023
Tssr44024 4 136021685 to 136021694 9 - TSS region transcription start site region 44024
Tssr44025 4 136021722 to 136021736 14 - TSS region transcription start site region 44025
Cpgi15091 4 136028335 to 136028511 176 CpG island CpG island 15091
Tssr44026 4 136028847 to 136028897 50 - TSS region transcription start site region 44026
Rpl11 4 136049947 to 136053371 3424 - protein coding gene ribosomal protein L11
Cpgi15092 4 136052439 to 136053546 1107 CpG island CpG island 15092
Tssr44027 4 136053343 to 136053415 72 - TSS region transcription start site region 44027