MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:133515906-133576011

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm42323	4	133512874 to 133522320	9446	-	protein coding gene	predicted gene, 42323
Tssr39486	4	133518721 to 133518732	11	+	TSS region	transcription start site region 39486
Tssr39487	4	133518737 to 133518750	13	+	TSS region	transcription start site region 39487
Cpgi15005	4	133518767 to 133519795	1028		CpG island	CpG island 15005
Kdf1	4	133518963 to 133530790	11827	+	protein coding gene	keratinocyte differentiation factor 1
Tssr39488	4	133518981 to 133519010	29	+	TSS region	transcription start site region 39488
Cpgi15006	4	133528549 to 133528969	420		CpG island	CpG island 15006
Nudc	4	133532542 to 133545996	13454	-	protein coding gene	nudC nuclear distribution protein
Tssr43766	4	133536769 to 133536784	15	-	TSS region	transcription start site region 43766
Cpgi15007	4	133545401 to 133546268	867		CpG island	CpG island 15007
Tssr43767	4	133545618 to 133545628	10	-	TSS region	transcription start site region 43767
Tssr43768	4	133545906 to 133546011	105	-	TSS region	transcription start site region 43768
Tssr39489	4	133553370 to 133553393	23	+	TSS region	transcription start site region 39489
Nr0b2	4	133553376 to 133556536	3160	+	protein coding gene	nuclear receptor subfamily 0, group B, member 2
Gm23158	4	133558824 to 133558949	125	-	miRNA gene	predicted gene, 23158
Cpgi15008	4	133574142 to 133575320	1178		CpG island	CpG island 15008
Tssr39490	4	133574728 to 133574771	43	+	TSS region	transcription start site region 39490
Gpatch3	4	133574745 to 133584242	9497	+	protein coding gene	G patch domain containing 3