Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:129307847-129447924

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sync 4 129287617 to 129308559 20942 + protein coding gene syncoilin
Rbbp4 4 129307100 to 129335370 28270 - protein coding gene retinoblastoma binding protein 4, chromatin remodeling factor
Tssr39138 4 129308413 to 129308418 5 + TSS region transcription start site region 39138
Gm26722 4 129309081 to 129318443 9362 + lincRNA gene predicted gene, 26722
Tssr43491 4 129309872 to 129309886 14 - TSS region transcription start site region 43491
Tssr39139 4 129312574 to 129312578 4 + TSS region transcription start site region 39139
Tssr39140 4 129327184 to 129327189 5 + TSS region transcription start site region 39140
Cpgi14889 4 129334606 to 129336004 1398 CpG island CpG island 14889
Tssr43492 4 129335243 to 129335264 21 - TSS region transcription start site region 43492
Tssr43493 4 129335297 to 129335317 20 - TSS region transcription start site region 43493
Tssr43494 4 129335324 to 129335377 53 - TSS region transcription start site region 43494
Zbtb8os 4 129335592 to 129347083 11491 + protein coding gene zinc finger and BTB domain containing 8 opposite strand
Tssr39141 4 129335593 to 129335645 52 + TSS region transcription start site region 39141
Tssr39142 4 129335962 to 129335987 25 + TSS region transcription start site region 39142
Tssr39143 4 129336016 to 129336041 25 + TSS region transcription start site region 39143
Zbtb8a 4 129353632 to 129378028 24396 - protein coding gene zinc finger and BTB domain containing 8a
Tssr43495 4 129374285 to 129374327 42 - TSS region transcription start site region 43495
Tssr39144 4 129375328 to 129375346 18 + TSS region transcription start site region 39144
Tssr43496 4 129376012 to 129376026 14 - TSS region transcription start site region 43496
Cpgi14890 4 129376829 to 129378079 1250 CpG island CpG island 14890
Tssr43497 4 129377826 to 129377838 12 - TSS region transcription start site region 43497
Tssr43498 4 129377847 to 129377924 77 - TSS region transcription start site region 43498
Tssr43499 4 129377933 to 129377950 17 - TSS region transcription start site region 43499
Tssr43500 4 129378996 to 129379006 10 - TSS region transcription start site region 43500
Gm12980 4 129379844 to 129380179 335 + pseudogene predicted gene 12980
Tssr39145 4 129381415 to 129381438 23 + TSS region transcription start site region 39145
C330020E22Rik 4 129382546 to 129407475 24929 + lncRNA gene RIKEN cDNA C330020E22 gene
Tssr39146 4 129382685 to 129382706 21 + TSS region transcription start site region 39146
Tssr39147 4 129382721 to 129382767 46 + TSS region transcription start site region 39147
Cpgi14891 4 129406491 to 129406825 334 CpG island CpG island 14891
Zbtb8b 4 129425765 to 129440853 15088 - protein coding gene zinc finger and BTB domain containing 8b
Cpgi14892 4 129440541 to 129440871 330 CpG island CpG island 14892
Tssr43501 4 129440800 to 129440823 23 - TSS region transcription start site region 43501
Tssr43502 4 129446966 to 129446971 5 - TSS region transcription start site region 43502