MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:129295297-129375317

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Sync	4	129287617 to 129308559	20942	+	protein coding gene	syncoilin
Rbbp4	4	129307100 to 129335370	28270	-	protein coding gene	retinoblastoma binding protein 4, chromatin remodeling factor
Tssr39138	4	129308413 to 129308418	5	+	TSS region	transcription start site region 39138
Gm26722	4	129309081 to 129318443	9362	+	lincRNA gene	predicted gene, 26722
Tssr43491	4	129309872 to 129309886	14	-	TSS region	transcription start site region 43491
Tssr39139	4	129312574 to 129312578	4	+	TSS region	transcription start site region 39139
Tssr39140	4	129327184 to 129327189	5	+	TSS region	transcription start site region 39140
Cpgi14889	4	129334606 to 129336004	1398		CpG island	CpG island 14889
Tssr43492	4	129335243 to 129335264	21	-	TSS region	transcription start site region 43492
Tssr43493	4	129335297 to 129335317	20	-	TSS region	transcription start site region 43493
Tssr43494	4	129335324 to 129335377	53	-	TSS region	transcription start site region 43494
Zbtb8os	4	129335592 to 129347083	11491	+	protein coding gene	zinc finger and BTB domain containing 8 opposite strand
Tssr39141	4	129335593 to 129335645	52	+	TSS region	transcription start site region 39141
Tssr39142	4	129335962 to 129335987	25	+	TSS region	transcription start site region 39142
Tssr39143	4	129336016 to 129336041	25	+	TSS region	transcription start site region 39143
Zbtb8a	4	129353632 to 129378028	24396	-	protein coding gene	zinc finger and BTB domain containing 8a
Tssr43495	4	129374285 to 129374327	42	-	TSS region	transcription start site region 43495