Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:127355101-127760502

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gjb5 4 127354809 to 127358164 3355 - protein coding gene gap junction protein, beta 5
Tssr43425 4 127358104 to 127358107 3 - TSS region transcription start site region 43425
Tssr43426 4 127358109 to 127358120 11 - TSS region transcription start site region 43426
Tssr43427 4 127358124 to 127358187 63 - TSS region transcription start site region 43427
Tssr43428 4 127358195 to 127358208 13 - TSS region transcription start site region 43428
D4Mit336 4 127361763 to 127361884 121 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 336
Tssr39061 4 127371756 to 127371759 3 + TSS region transcription start site region 39061
D4Mit223 4 127388478 to 127388625 147 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 223
Gm12947 4 127408379 to 127408798 419 - pseudogene predicted gene 12947
Tssr43429 4 127408818 to 127408820 2 - TSS region transcription start site region 43429
Gm40252 4 127417126 to 127424822 7696 + lncRNA gene predicted gene, 40252
4930471C06Rik 4 127474848 to 127476840 1992 + lincRNA gene RIKEN cDNA 4930471C06 gene
Tssr39062 4 127522439 to 127522450 11 + TSS region transcription start site region 39062
D4Mit337 4 127524621 to 127524883 262 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 337
1700080G11Rik 4 127531622 to 127532885 1263 + lincRNA gene RIKEN cDNA 1700080G11 gene
Tssr43430 4 127534653 to 127534670 17 - TSS region transcription start site region 43430
Tssr43431 4 127534673 to 127534679 6 - TSS region transcription start site region 43431
A630031M04Rik 4 127545101 to 127570502 25401 + lincRNA gene RIKEN cDNA A630031M04 gene
Gm40255 4 127618745 to 127619853 1108 + lncRNA gene predicted gene, 40255
Cpgi14850 4 127620009 to 127620164 155 CpG island CpG island 14850