MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:123580295-123680703

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr43281	4	123607138 to 123607143	5	-	TSS region	transcription start site region 43281
Tssr43282	4	123612103 to 123612107	4	-	TSS region	transcription start site region 43282
Tssr43283	4	123613701 to 123613751	50	-	TSS region	transcription start site region 43283
Tssr43284	4	123613756 to 123613768	12	-	TSS region	transcription start site region 43284
Tssr43285	4	123613775 to 123613799	24	-	TSS region	transcription start site region 43285
Tssr43286	4	123613801 to 123613813	12	-	TSS region	transcription start site region 43286
Tssr43287	4	123613821 to 123613833	12	-	TSS region	transcription start site region 43287
Mir6398	4	123616420 to 123616521	101	+	miRNA gene	microRNA 6398
Tssr38863	4	123624765 to 123624805	40	+	TSS region	transcription start site region 38863
Tssr38864	4	123630251 to 123630256	5	+	TSS region	transcription start site region 38864
Gm12926	4	123630295 to 123630703	408	+	pseudogene	predicted gene 12926
Gm35241	4	123644650 to 123647879	3229	-	pseudogene	predicted gene, 35241
Cpgi14755	4	123663703 to 123665561	1858		CpG island	CpG island 14755
Tssr43288	4	123664725 to 123664805	80	-	TSS region	transcription start site region 43288
Tssr38865	4	123664808 to 123664832	24	+	TSS region	transcription start site region 38865
Tssr43289	4	123665468 to 123665488	20	-	TSS region	transcription start site region 43289
Tssr43290	4	123665501 to 123665513	12	-	TSS region	transcription start site region 43290
Gm12925	4	123665881 to 123671210	5329	+	antisense lncRNA gene	predicted gene 12925