MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:116787574-116827617

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tesk2	4	116720907 to 116804248	83341	+	protein coding gene	testis-specific kinase 2
D4Dcr17	4	116796039 to 116796142	103		DNA segment	DNA Segment, Chr 4, Derry C. Roopenian 17
Toe1	4	116804003 to 116807635	3632	-	protein coding gene	target of EGR1, member 1 (nuclear)
Cpgi14641	4	116807159 to 116808046	887		CpG island	CpG island 14641
Tssr42927	4	116807532 to 116807573	41	-	TSS region	transcription start site region 42927
Tssr42928	4	116807574 to 116807617	43	-	TSS region	transcription start site region 42928
Tssr38583	4	116807714 to 116807726	12	+	TSS region	transcription start site region 38583
Mutyh	4	116807723 to 116819440	11717	+	protein coding gene	mutY DNA glycosylase
Tssr38584	4	116807728 to 116807751	23	+	TSS region	transcription start site region 38584
Hpdl	4	116819907 to 116821508	1601	-	protein coding gene	4-hydroxyphenylpyruvate dioxygenase-like
Cpgi14642	4	116820552 to 116821655	1103		CpG island	CpG island 14642
Tssr42929	4	116820880 to 116820887	7	-	TSS region	transcription start site region 42929
Tssr42930	4	116820905 to 116820906	1	-	TSS region	transcription start site region 42930
Tssr42931	4	116821472 to 116821487	15	-	TSS region	transcription start site region 42931
Tssr42932	4	116821488 to 116821499	11	-	TSS region	transcription start site region 42932
Tssr42933	4	116821501 to 116821521	20	-	TSS region	transcription start site region 42933
Cpgi14643	4	116824537 to 116824984	447		CpG island	CpG island 14643
Gm12996	4	116824903 to 116830603	5700	+	antisense lncRNA gene	predicted gene 12996