MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:107981938-108081961

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Slc1a7	4	107968334 to 108013532	45198	+	protein coding gene	solute carrier family 1 (glutamate transporter), member 7
Podn	4	108014793 to 108032090	17297	-	protein coding gene	podocan
Cpgi14549	4	108021184 to 108021620	436		CpG island	CpG island 14549
Tssr42701	4	108027307 to 108027343	36	-	TSS region	transcription start site region 42701
Cpgi14550	4	108030993 to 108032579	1586		CpG island	CpG island 14550
Tssr42702	4	108031894 to 108031905	11	-	TSS region	transcription start site region 42702
Tssr42703	4	108031938 to 108031961	23	-	TSS region	transcription start site region 42703
Tssr42704	4	108032069 to 108032098	29	-	TSS region	transcription start site region 42704
Gm23354	4	108041697 to 108041800	103	-	snRNA gene	predicted gene, 23354
Scp2	4	108043830 to 108144971	101141	-	protein coding gene	sterol carrier protein 2, liver
Tssr42705	4	108051877 to 108051918	41	-	TSS region	transcription start site region 42705
Tssr42706	4	108069964 to 108069968	4	-	TSS region	transcription start site region 42706
Cpgi14551	4	108071304 to 108071624	320		CpG island	CpG island 14551
Tssr42707	4	108071327 to 108071408	81	-	TSS region	transcription start site region 42707
Tssr42708	4	108071643 to 108071652	9	-	TSS region	transcription start site region 42708
Tssr42709	4	108074461 to 108074476	15	-	TSS region	transcription start site region 42709
Tssr42710	4	108080767 to 108080809	42	-	TSS region	transcription start site region 42710